Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0757 ATGGACCTTCAACTAGGCCTCTCTCTCAATTCTTGTTCTTTTGATTCCGATGATGACGATCTCTTATCTTCATCGTTCCCTGTTATCTCTCACAATAAGAAACGTAGCTTCACCGATCTCAGAGAAGAACACGACGACGACGACGTTTTGCTTCCAACTTTGCCTCTCCTTCCCTTAACACCTTCCCATGAAGCTGACCTTGACGACGACCTCCGCACCAGCTCCTCCATCGTCACCAAACATGATGGGGATGATGGTGGAGAATCTGCAGCAGTAGGGTGGCCGCCATTAATGTCTCAGAGGAAGAAGCTTCGCTGTGAAGAAGATGTCGGCATGGCGGAGATTATTCGTCATTACATTAAAGTGAAGATGGAGGGAGAAGGAATTGGACGAAAGGTTGATCTGAGCTTGCATCATTCTTTTCAGAAGCTCAAGGAAACCTTGATCGCCATGTTTGGAAAATGTAATCATCATTCACACTGCTATGAATTGGCTTACCAGGACAGCGAAGGTGACTGGTTGCTTGCAGAAGATCTTCCATGGAAGTAA 549 0.4627 MDLQLGLSLNSCSFDSDDDDLLSSSFPVISHNKKRSFTDLREEHDDDDVLLPTLPLLPLTPSHEADLDDDLRTSSSIVTKHDGDDGGESAAVGWPPLMSQRKKLRCEEDVGMAEIIRHYIKVKMEGEGIGRKVDLSLHHSFQKLKETLIAMFGKCNHHSHCYELAYQDSEGDWLLAEDLPWK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0757 182 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 181 IPR003311 GO:0005634|GO:0006355
Lele18g0757 182 Pfam AUX/IAA family 30 155 IPR033389 -
Lele18g0757 182 ProSiteProfiles PB1 domain profile. 117 182 IPR000270 GO:0005515
Lele18g0757 182 Gene3D - 118 182 - -
Lele18g0757 182 SUPERFAMILY CAD & PB1 domains 118 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0757 Lele-ChrLele18 4647804 4648629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0757 117 181 B3 DNA Binding Superfamily AT2G46530 38.235 8.24e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele18g0757 AUX_IAA 1.1e-13 CL0072