Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0746 ATGTGTTATAGCGGTAACCGAGAGCTTCAAGAAGAAAGAATTACAGGAATAATGGCGGGAAACATAAAGATGACGACTATGATCAGAGCGGCTATTCTCGCCTTGTCCCTGTTTTCTTTCTCAGAAACCATATCATGCCAACAAGTGCTCGTCGTCGGAGCAAAATTGGGGTGGACGATTCCTCCGGCAGGCCCTGCACCCTATGGCGCTTGGGCCGCCTCGCACATCTTCGTCGTCGGAGACGAACTCGTGTTCAATTTCACGAACGGAGACCAAGACGTGGCACGAGTGACGAGGGAGGCGTTCTTGACCTGCAACACGACGAACCCCATCGAAGTGAAGAATACGAACCCTGCGAATTTCACGCTCAACGATACCGGAGACTGGTACTTCACGAGCACGTTAGATAAGCACTGTGAATTAGGTCAAAAGCTAGCAATTCACGTCGTGTCAGCTTCAGGGCCATCGCCGAGCCCACAACCCAAACCCAGAGGACCTCGGAACTTCACTGTTGGTGGTCCCTTGGGATGGATTGTCCCTCCCGGCGGTGAAATCGTCTACATTTCCTGGGCTCGCACTAAAAATTTCAGAGTCGGAGACGCCCTCGAGTTCTGGTTCATAAATGGAACACAAGATGTTGCAGAGGTGAAGAAGGAGGATTATGAGAAATGTCAGACGAACAAAACTGTAGCAGTTTACTCGAGTAGTCCGGTGAGGATCGTGTTGAAGACGACTGGGGAGCATTTCTACACGAGCACGTACCCTGATCACTGTGCCTTGGGACAGAAGCTAGCCATTAATGTCACTTCCAATACTTCGTCGTCTGGGTCTGCTTTCTCACCTGAAGGTGCTATGCCTCCATCTACTCCGGGAAGCTCTGCCTCTAGGGTTCTATCTGCATCTATGCCGGCCTTCTTCGCCTTCATTGCCATGGCTTTATTCTACCATTGA 951 0.5079 MCYSGNRELQEERITGIMAGNIKMTTMIRAAILALSLFSFSETISCQQVLVVGAKLGWTIPPAGPAPYGAWAASHIFVVGDELVFNFTNGDQDVARVTREAFLTCNTTNPIEVKNTNPANFTLNDTGDWYFTSTLDKHCELGQKLAIHVVSASGPSPSPQPKPRGPRNFTVGGPLGWIVPPGGEIVYISWARTKNFRVGDALEFWFINGTQDVAEVKKEDYEKCQTNKTVAVYSSSPVRIVLKTTGEHFYTSTYPDHCALGQKLAINVTSNTSSSGSAFSPEGAMPPSTPGSSASRVLSASMPAFFAFIAMALFYH 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0746 316 FunFam Cupredoxin superfamily protein 166 274 - -
Lele18g0746 316 PANTHER BLUE COPPER PROTEIN 168 273 IPR039391 GO:0009055
Lele18g0746 316 SUPERFAMILY Cupredoxins 167 269 IPR008972 -
Lele18g0746 316 Gene3D - 50 159 IPR008972 -
Lele18g0746 316 Gene3D - 167 280 IPR008972 -
Lele18g0746 316 ProSiteProfiles Phytocyanin domain profile. 167 270 IPR003245 GO:0009055
Lele18g0746 316 SUPERFAMILY Cupredoxins 50 150 IPR008972 -
Lele18g0746 316 Pfam Plastocyanin-like domain 185 262 IPR003245 GO:0009055
Lele18g0746 316 Pfam Plastocyanin-like domain 58 143 IPR003245 GO:0009055
Lele18g0746 316 ProSiteProfiles Phytocyanin domain profile. 48 151 IPR003245 GO:0009055
Lele18g0746 316 FunFam Cupredoxin superfamily protein 47 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0746 Lele-ChrLele18 4586599 4587726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0746 170 270 Phytocyanin Superfamily AT2G25060 36.275 5.40e-16 73.2