Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0734 ATGTTGAGCAGGAAGAGGAGGGTGTGGCTGGGGACATTTGAGACGGCGGAAGAAGCGGCGAGAGCGTACGATCAAGCTGCCATTTTGATGAGTGGACGGAATGCTAAGACGAATTTTCCGATATCCCAGACTCCGGACGGCGATCCTAAGGCGGCGGCAGTGGCGGGGTCTGCTGCCGATCATAACAAGGCGGCAGGGGCAGCGAGGGATCTGGAAGAGATTCTACACGCGAAGCTGAGGAAATGTGGGAAGCTGCCGTCGCCGTCCATGACGTGCCTGAGGCTGGACACTGAGAACTCCAACATCGGAGTGTGGCAGAAACGCGCCGGCAAGCGTACGGATAACTCCAACTGGGTGATGACAGTCGAGCTGGGAAGGAAGACCAACAATAACAGCAACAGTAACAGTGAGAATCACACTAACAGTAGTAATGGTACAGAGAAAACGACGTCGTCGTCGCCGTGGACTTGTGAGGAGTCTGCAATCTCAGAAGGAGGAGGGATGAACGAAGAAGAAAGAATTGCACTGCAAATGATCGAAGAACTTCTGAACATAAACTGTCCAAGTCCTCCACCACCATCATCATCAGGACCTTCATTTCATGATATGGTTGAAGAAGACAACCACCATGCTCATCATCATGGTGGAGAAAGCTTTCTCTTTGATGACATTATGGTGTGTGGGACAAGAACAAAAAAAGGTGGGTGA 708 0.5127 MLSRKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPISQTPDGDPKAAAVAGSAADHNKAAGAARDLEEILHAKLRKCGKLPSPSMTCLRLDTENSNIGVWQKRAGKRTDNSNWVMTVELGRKTNNNSNSNSENHTNSSNGTEKTTSSSPWTCEESAISEGGGMNEEERIALQMIEELLNINCPSPPPPSSSGPSFHDMVEEDNHHAHHHGGESFLFDDIMVCGTRTKKGG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0734 235 MobiDBLite consensus disorder prediction 126 159 - -
Lele18g0734 235 SMART rav1_2 2 46 IPR001471 GO:0003700|GO:0006355
Lele18g0734 235 Gene3D AP2/ERF domain 2 42 IPR036955 GO:0003700|GO:0006355
Lele18g0734 235 SUPERFAMILY DNA-binding domain 4 42 IPR016177 GO:0003677
Lele18g0734 235 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 157 - -
Lele18g0734 235 MobiDBLite consensus disorder prediction 184 215 - -
Lele18g0734 235 CDD AP2 3 42 IPR001471 GO:0003700|GO:0006355
Lele18g0734 235 ProSiteProfiles AP2/ERF domain profile. 1 40 IPR001471 GO:0003700|GO:0006355
Lele18g0734 235 Pfam AP2 domain 4 31 IPR001471 GO:0003700|GO:0006355
Lele18g0734 235 MobiDBLite consensus disorder prediction 126 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0734 Lele-ChrLele18 4492440 4493147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0734 5 186 AP2-EREBP Transcription Factor Family AT1G15360 53.846 5.05e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele18g0734 AP2 5.4e-07 CL0081