Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0719 ATGGCCACCACCAAGGCCATAATAGCCAGAGACGAATCCGATTATGATAGTAGTTCCTCCTCCCTCACCACTCTGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGCCGTCGCAGCAGCTCCGTCTCCGTTTGTTCCTCCACCACCGCAGACACCACCACCTCCTCTCTGTTCCTCGGCTCCCACGCCAAGAAGCCTCACAAGGCCAACCAAGCCGCATGGGAGGACATGTCCCGCCTTCGCCGCGACAGTAACGGCCAACTCGGCCTCCACCACTTCCGTCTTCTCCGGCGACTCGGCGGCGGCGACATCGGCAACGTCTACCTCTGTCAGATTAGGAACCCCCTCGTGGTGGGCTCGAAACAGAGCCTCTACGCCATGAAAGTGGTCGACAGAGAAGCGCTTTCTGTGAGAAACAAGTTGCAGAGAGCTGTGATGGAGAAAGAGATTCTGGGCATGCTTGATCACCCATTTTTGCCCACTTTATATGCTGAGTTTGAAGCCTCTCATTACTCTTGCTTGGTCATAGAGTTCTGTCCCGGCGGTGACTTGTATGCTTCTCGCCAGCGTCAGCCAGGGAAACGATTCAGCATTCAATCTTCCAAGTTTTATGCAGCTGAGACACTGTTGGCTTTGGAGTATCTTCACATGATGGGCATAGTGTATAGAGATTTGAAGCCAGAGAATGTGCTGGTGAGAGAAGATGGGCACATTATGCTCTCTGATTTTGATCTCTCTCTCAAATGCGACGTCGTTCCAAAGCTCTTGAGAAGTAAATCCAGTTTCAAAACCATTCAAAGGAACTCTTCTTCATCATCATCTTCAACATCTCCTGCCTGTACTGCCCCCATGCAATCTTGTTTCTCATCAGCATCATTTCGCAGCAAGAGCAAGAGAGAAAGTAGAGTCACAATAATCATAAGAGAAAACGTTGGAGTCCAAAATGAACAGGCAAAAAAAGACGACATTGATGAAGATGATGATGATGAGCCTGAGCTAGTTGCAGAGCCTATTAATGCTAAGTCTATGTCATTTGTAGGTACTCATGAGTACTTAGCACCGGAAGTGATATCAGGGCAAGGCCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAGTGTTCTTATATGAGATGTTATATGGAAGAACACCATTCAAAGGTGAGAACAACGGGAAGACACTCATAAACATCCTGAAGCAGCCATTGGCATTTCCAAGAATTGCAGCTAGCAACAGCAAGGAGTATGAAGAAATGGTGAGAGTTCAAGACCTGATAAGCAAACTATTAGTGAAGAATCCAAAGAAGAGAATCGGAAGCTGCATGGGTTCTGTTGAAATCAAGAGGCATGAATTCTTCAGGGGTGTGAATTGGGCTCTGATTAGATCAATTAAACCTCCCGCGGTTCCTGCTGATATGAACAAGATTAGAAGTAGCAGAGTTTTGTTACCAAAACTAAGCAAGAAAGATAGAGATCAACCCTATCAGATTTCTCATCATTTTGACTACTTCTAA 1527 0.4722 MATTKAIIARDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVSVCSSTTADTTTSSLFLGSHAKKPHKANQAAWEDMSRLRRDSNGQLGLHHFRLLRRLGGGDIGNVYLCQIRNPLVVGSKQSLYAMKVVDREALSVRNKLQRAVMEKEILGMLDHPFLPTLYAEFEASHYSCLVIEFCPGGDLYASRQRQPGKRFSIQSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKTIQRNSSSSSSSTSPACTAPMQSCFSSASFRSKSKRESRVTIIIRENVGVQNEQAKKDDIDEDDDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASNSKEYEEMVRVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFRGVNWALIRSIKPPAVPADMNKIRSSRVLLPKLSKKDRDQPYQISHHFDYF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0719 508 FunFam protein kinase PINOID 184 252 - -
Lele18g0719 508 ProSiteProfiles Protein kinase domain profile. 98 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0719 508 Gene3D Phosphorylase Kinase; domain 1 96 183 - -
Lele18g0719 508 SMART serkin_6 98 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0719 508 Gene3D Transferase(Phosphotransferase) domain 1 345 475 - -
Lele18g0719 508 Pfam Protein kinase domain 99 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0719 508 Pfam Protein kinase domain 347 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0719 508 PANTHER FLIPPASE KINASE 1-RELATED 29 478 - -
Lele18g0719 508 FunFam protein kinase PINOID 2 96 183 - -
Lele18g0719 508 CDD STKc_phototropin_like 96 475 - -
Lele18g0719 508 FunFam serine/threonine-protein kinase D6PK-like 345 475 - -
Lele18g0719 508 Gene3D Transferase(Phosphotransferase) domain 1 184 253 - -
Lele18g0719 508 SUPERFAMILY Protein kinase-like (PK-like) 80 479 IPR011009 -
Lele18g0719 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0719 Lele-ChrLele18 4394603 4396243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0719 1 508 AGC Kinase Gene Family AT2G26700 56.044 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele18g0719 Pkinase 1.9e-30 CL0016