Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0709 ATGACTTTTTCACCGGCTATTCCTGTGGTCCATTTCTACTGTCCGTTACGGGGAGCTATGGGGCATGGAGCTGTTTACGAAAATAGCCTTCCGCCCCACAGACTTCGGGTTCCTGGAGAAGCTAGTAGGGTTGCTGTCGATCACGGACAATGTTGTGAATGGACTCTTCGCACCGTGGATATAATTCTCACATTCTTCGTTGCTTACATTGACAAAATCACCTACCTCTTGGTTGAAGATTGGAAAGCCATTGCTTCGAAATATCTCAAGACTTGGTTCGTCTTCGATATCATCTCCATTATCCCTCCCGAGCTCGCTCGCCAGGTTCCCATCTCACCATTTCAATCCTATGGACCTTTCAACATGCTTCGCCTCTGGCGACTTGGACGAGTTAGTGCCCTGTTTGCAAGGTACGTCACCATCTTTGCTGTTCACTTAGCCGCATGCTTCTTCTATTATATTGCTGCACATCATGCTGATCCTAAACAGACCTGGATCGGGCTATTGTTGGAAGACGTCCATCAAGAGAGCTTGTACACAAAATATGTGTATTCTATGTACTGGTCTATTACTACTTTAGCAACTGTTGGCTATGGTTATTTGCATGCAGTGAATACGTCAGAGATGGTCTTCGACATCTTTTACATGTTCTTCAATCCAGGAATTCACCAGGAAGTTCGTGAAGTTTTTAAGAACGAAGAACAAACTGATCTTTATATATTAGTCACTGGTGCTGTGGTCGTAGGCGAGGCAAAAGCTTGTGATGTCATTGGCGAGATCGAAGTGCTTTGCTATAGACTACAGCACTTTACCGTTCGAACCAAGCGATTGAGCCAGCTACTGAGGCTGAAACGCACTACATTTCTAAATGCTATTCAGTCCAACGTGGGAGATGGGAACGTTATCATGAATAATCTCCTTCAGGCCTGCGACCCTTTTATGGATGGAATTCTAGTGACTACAGAGAACTTGCTAGCGAGTGGTAGGGTGAACCTATCACTTAGTCTGTCCTTTGCCGCATTAAGAGGAGACGACTGGTTGTTGCATCAATTGTTGAATCGTGGCTTGGATCCAAATGACTCCGACAACAAAGGAAGGACTGCTTTGTATGAACAGACATCAGAATTACTACTCAACCTTAGGCTTAATTCATATGCAGATTATGATGGTAGTGTTCCATTATGGGAGGCAATAGTGGGAAGACACGAATCTGTGAGCAAGCTGTTAGTAGAAAATGGCGCTAACATAGAATGTGGAGATATGGGTCAATTTGCATGCATTGCGGCTGAACAGGATCAACAGGGACATGACGAACTTAAGACTATTTTTGGGTCTATTGTGGAGCCTATGGCTCCAACTCCTGCAAATTCTACTCCTGAGAGGTCTGTTGGAAGAATTGCAAGAACTGGGAAGAACCATGGAAATCACCAACCAAAAGTAACAATTAGTTGCCCTGAAAAGGCTGAAATTGCTGGAAAAATTGTGCTTCTACCAGGGAACTTTAAAAATCTACTTGAGATTGGAGCTAATAGATTTGGTATCACTCCTGCTAGGATTCTGAGCAGGGATGGAGCTGAAATTGATGATGTAGATGTGATTAGAGATGGCGATCATCTTTTGTTTGTCAGTTCGGAAAAGATCTGA 1644 0.4386 MTFSPAIPVVHFYCPLRGAMGHGAVYENSLPPHRLRVPGEASRVAVDHGQCCEWTLRTVDIILTFFVAYIDKITYLLVEDWKAIASKYLKTWFVFDIISIIPPELARQVPISPFQSYGPFNMLRLWRLGRVSALFARYVTIFAVHLAACFFYYIAAHHADPKQTWIGLLLEDVHQESLYTKYVYSMYWSITTLATVGYGYLHAVNTSEMVFDIFYMFFNPGIHQEVREVFKNEEQTDLYILVTGAVVVGEAKACDVIGEIEVLCYRLQHFTVRTKRLSQLLRLKRTTFLNAIQSNVGDGNVIMNNLLQACDPFMDGILVTTENLLASGRVNLSLSLSFAALRGDDWLLHQLLNRGLDPNDSDNKGRTALYEQTSELLLNLRLNSYADYDGSVPLWEAIVGRHESVSKLLVENGANIECGDMGQFACIAAEQDQQGHDELKTIFGSIVEPMAPTPANSTPERSVGRIARTGKNHGNHQPKVTISCPEKAEIAGKIVLLPGNFKNLLEIGANRFGITPARILSRDGAEIDDVDVIRDGDHLLFVSSEKI 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0709 547 Pfam Ion transport protein 58 219 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele18g0709 547 Gene3D - 49 219 - -
Lele18g0709 547 ProSiteProfiles KHA domain profile. 479 547 IPR021789 -
Lele18g0709 547 CDD CAP_ED 207 295 IPR000595 -
Lele18g0709 547 SUPERFAMILY Ankyrin repeat 336 436 IPR036770 -
Lele18g0709 547 Pfam KHA, dimerisation domain of potassium ion channel 479 541 IPR021789 -
Lele18g0709 547 PANTHER POTASSIUM CHANNEL AKT1 430 543 IPR045319 GO:0005249|GO:0006813
Lele18g0709 547 SUPERFAMILY cAMP-binding domain-like 231 308 IPR018490 -
Lele18g0709 547 ProSiteProfiles cAMP/cGMP binding motif profile. 229 309 IPR000595 -
Lele18g0709 547 Gene3D - 333 459 IPR036770 -
Lele18g0709 547 SUPERFAMILY Voltage-gated potassium channels 52 219 - -
Lele18g0709 547 Gene3D Jelly Rolls 220 308 IPR014710 -
Lele18g0709 547 ProSiteProfiles Ankyrin repeat profile. 389 421 IPR002110 GO:0005515
Lele18g0709 547 SMART ANK_2a 389 418 IPR002110 GO:0005515
Lele18g0709 547 SMART ANK_2a 331 360 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0709 Lele-ChrLele18 4318596 4324760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0709 229 431 Ion Channels AT2G26650 56.195 7.15e-68 231