Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0701 ATGGACACAAATCTGCACCTGCGGGTTCTTACGGTGTATCCCCCCACCCCATCTTTGGGATTCGGCTATAGCAGTCGTTACAATGCTTCCTGTCTTTCCCTATTCTTGGACCCAGAAGAAGATCAAGTTAAATCCAGAATGAAGCCTATGCAGAAACACACGGATCGTAGAAGAAGATGTAGGAGAAGAAGCCATTGCAAACCAGAGATATTAAAAGAGAAAGGGGTTGATTTAGAACTGAAGAATCCTTATTATGCTGCTTCTTACAATAATAATAGCCTTGAGTTCACTCATAGGCCTGGTTTTGGCCAGCTTGGGACTAAGTGTTTGGTCAAAGCTAACCACTTTCTTGCAGATATATCAGCATCTGACTTGAGCCATTACAGTGTTAAGATAACACCAGAAGTTACTTCTCGTAAAATAAGCAAAGCTATCATTGCTGAGTTGGTGAGGCTTCATAGAAACACAGACTTGGGGATGAGGCTCCCAGTTTATGATGGGGGAAGGAATCTTTACACCGCTGGTTTGCTTCCTTTTACACACAAAGAATTCACCATAACATTGACCGAAGAAGATGAGGGAACAGGCAATACCAGGGAAAGAGAGTTTAGAGTGAAAATCAAGTTCGCAACTCGAGTTAGCATGAATCAACTACGAGAGCTTCTCAGTGGGAAACAAGTGAACACCCCACAAGAAGCACTTAACATCATTGATATTTTATTAAGGGAGCTTGCAGCTCAAAGTTACGTGTCAGTTGGAAGGTTTCTCTATTCTGCTGATATAAAAAAACCACAGCAACTAGGTGGTGGTTTGGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCACTAAACATTGACATGTCATCAATGGCGTTTATAGAACCACTCCCTGTCATTGATTTTGTTGCTCAAATTCTGGGTAAAGATGTGCATTCTAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAAGCCTTAAGAGGTGTGAAAGTTGAAGTTACTCATAGAGGAAATGTTCGAAGGAAGTACAGGATTTCAGGACTTACATCACAGCCTACAAGAGAGCTCACATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTCCGGGAGATGTATGGTTATACAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAACGAAAAGAAGGTGAATTATTTGCCAATGGAGGCATGCAAGATAGTTGGAGGCCAGAGATATACAAAAGGGCTAAATGAGAAGCAGATAACTTCTCTTCTTAAAGTTTCATGCCAGAGACCTCGTGAGCAAGAGCTAGATATTCTACAGACAGTTGAGCAAAATGATTATGAGAATAACCCTTATGCAAAAGAGTTTGGTATCAGCATAGACGACAAGCTTGCATCTGTCGAAGCCCGGGTTCTGCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTTATAAATGGAAGCATAGTAAGATATTGGGCATGTATCAATTTCTCTCGTAGTGTTCAAGAAAGCACGGCTCGGGGCTTTTGCCAACAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGAGCCAGTAATTCCTATACATACAGCAAGACCAGATCAGGTTAAAAAGGCCTTGAAGTACGTACACTCTTCTGCTTTGGACAAACTTGAAGGGAAAGAACTTGAGTTGCTCATTGCCATTCTTCCAGACAATAACGGCTCTCTCTACGGTGATCTCAAAAGGATTTGTGAAACAGATCTGGGGTTGATTTCTCAGTGCTGTCTCACAAAACACGTCTTCAAGATTAATAGACAATACCTGGCAAATCTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCGTTGAGTTGGAGGATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGGGCTGATGTAACTCATCCAGAATCTGGAGAAGATTCTTCTCCTTCCATTGCTGCTGTTGTGGCCTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGCGAAGAACTTATTCAAGACCTTTTCAAGTGTTGGAAAGATCCTCAGCGAGGCGTAGTTTATGGTGGCATGATTAGAGAGCTCTTACTCTCATTTAAGAAGGCAACTGGACAGAAACCATTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAATTCTACCAGGTTTTGTTGTATGAGCTTGATGCGATCCGCAAGGCTTGTGCATCACTGGAACCTAGTTACCAACCTCCAGTAACATTTGTGGTGGTTCAAAAGAGGCATCACACAAGGCTCTTCTCAAGCAATCATGATGACAGAAATAGCACCGACAGGAGCGGCAACATCTTACCTGGTACGGTGGTGGATTCTAAGATCTGTCATCCCACAGAATTTGACTTTTATTTATGCAGTCATGCAGGAATACAGGGCACGAGTAGACCAGCTCACTATCATGTCCTGTGGGACGAGAACAAATTCACTGCAGACGAGATTCAATCTCTAACCAACAACTTATGCTACACGTATGCAAGATGCACAAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCTTACAGAGCTCGATTCTACATGGAACCAGATGTGCATGAGAATGCTGCTAAAGCATCACGTGGGGCAAGATCAAAGGATGGCTCAGTTGTTCGGCCATTGCCAGCTCTGAAAGACAAGGTCAAGAATGTCATGTTTTACTGTTAA 2856 0.4265 MDTNLHLRVLTVYPPTPSLGFGYSSRYNASCLSLFLDPEEDQVKSRMKPMQKHTDRRRRCRRRSHCKPEILKEKGVDLELKNPYYAASYNNNSLEFTHRPGFGQLGTKCLVKANHFLADISASDLSHYSVKITPEVTSRKISKAIIAELVRLHRNTDLGMRLPVYDGGRNLYTAGLLPFTHKEFTITLTEEDEGTGNTREREFRVKIKFATRVSMNQLRELLSGKQVNTPQEALNIIDILLRELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELTFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNPYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPIHTARPDQVKKALKYVHSSALDKLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANLALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAAKASRGARSKDGSVVRPLPALKDKVKNVMFYC 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0701 951 CDD Piwi_ago-like 461 911 IPR045246 -
Lele18g0701 951 FunFam Argonaute 10 481 654 - -
Lele18g0701 951 Pfam N-terminal domain of argonaute 108 241 IPR032474 -
Lele18g0701 951 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 92 913 - -
Lele18g0701 951 Gene3D - 660 951 IPR036397 GO:0003676
Lele18g0701 951 Pfam Mid domain of argonaute 500 577 IPR032473 -
Lele18g0701 951 FunFam Protein argonaute-2 296 422 - -
Lele18g0701 951 SUPERFAMILY Ribonuclease H-like 579 913 IPR012337 -
Lele18g0701 951 FunFam protein argonaute 10-like 660 951 - -
Lele18g0701 951 SMART Piwi_a_2 591 912 IPR003165 GO:0003676
Lele18g0701 951 ProSiteProfiles Piwi domain profile. 591 912 IPR003165 GO:0003676
Lele18g0701 951 Gene3D paz domain 297 421 - -
Lele18g0701 951 CDD PAZ_argonaute_like 302 416 - -
Lele18g0701 951 Pfam PAZ domain 307 433 IPR003100 GO:0005515
Lele18g0701 951 Pfam Argonaute linker 2 domain 447 489 IPR032472 -
Lele18g0701 951 ProSiteProfiles PAZ domain profile. 303 417 IPR003100 GO:0005515
Lele18g0701 951 SMART PAZ_2_a_3 307 439 IPR003100 GO:0005515
Lele18g0701 951 SMART DUF1785_2 250 302 IPR014811 -
Lele18g0701 951 Gene3D - 481 654 - -
Lele18g0701 951 Pfam Argonaute linker 1 domain 251 300 IPR014811 -
Lele18g0701 951 SUPERFAMILY PAZ domain 298 457 IPR036085 GO:0005515
Lele18g0701 951 Pfam Piwi domain 592 911 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0701 Lele-ChrLele18 4277462 4283986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0701 96 951 Eukaryotic Initiation Factors Gene Family AT5G43810 75.377 0.0 1399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0701 18 4277462 4283986 Lele19g0742 19 4367773 4375862 hybridization
Lele18g0701 18 4277462 4283986 Lele20g0718 20 14212440 14226804 hybridization