Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0673 ATGACTGGTCGTAGAAGAAAGAGGCATAACTTTAGCAGAATCCATGCTTTTTCATGTGGGAAAGCGTCGTTCAATGGGGAGCATTCGCTGATTGGAGGACCTGGGTTTTCAAGAATAGTATATTGCAACGACCCAGAACGAGTTGAGGCGAGTCTTATCAATTATGGTGATAACTACGTTAGAACAACAAAGTACACTTTGTTTTCGTTTCTTCCTAAGTCATTGTTTGAACAATTCAGAAGAGTTGCCAATTTCTTTTTCCTCTTATGTGCAATCCTCGCTTTCTTCCCTGTCTCTCCTTGGGATTCACCTTTCAGCTCTGTTTTCCCTCTGGTGTTTGTTGTTGGTCTTACAATGGCCAAAGAGATTCTTGAGGATTGGAGGAGGAAGAAGCAGGATATTGAAATGAATAACAGAAAGGTTAAAGTACATCATGGAGGAGCTTTTGATTCTACTAAATGGAAGGATCTGAAAGTTGGAGATGTAGTAAAAGTGGAGAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAGCTACGATGATTCAATTTGCTATGTGGAAACCACAAATCTTGATGGAGAAACAAACCTTAAACTTAAACAAGCATTGGAAGAAACTTCAAAGTTTCAAGAAGATTCAAGCTTTGAAAATTTCAAGGCCACTATTGCTTGTGAAGATCCAAATGCAAATTTGTATTCATTTATAGGAACTATGGAGATGGAAAGTCAACAATACCCTCTCACACCTCAGCAATTACTTCTTAGGGACTCTAAGCTTAGGAACACAGATTTTATTTATGGTGTGGTAATTTTTACAGGTCATGATACAAAGGTTATGCAGAACTCAACAGAGCCTCCTTCAAAGAGAAGCAACATTGAGAGTAGGATGGACAAAATTATCTACTTATTGTTCTGTTTGTTATTTGTGATTTCTTTTATTGGGTCTGTTTTCTTTGGGATTTATACAAGTGAAGACCTTGAAAATGGTAAAATGACAAGATGGTACCTTAGACCAGATGAGACTACTATTTTTTATGATCCAAAGAGAGCAGCAATTGCAGCAATGTTGCATTTCTTGACTTTCCTTATGTTGTATGGTTACTTCATTCCCATTTCCCTCTATGTGTCGATAGAAATTGTGAAGATTCTTCAGAGCTTTTTCATCAACCAAGACGTGCACATGTATTACGAGGAAACCGACAAGCCAGCGCATGCTCGTACCTCGAATTTGAACGAAGAACTTGGCCAAGTTGATACCATACTTTCTGATAAAACAGGAACTTTGACTTGTAACTCCATGGAATTCATCAAATGTTCCATTGCTGGGGTTGCTTATGGACAAGGAGTTACAGAAGTGGAGAGAGCTCTAGCAAGAAGGAAAGGGTACCCTCTAGAAGAAGAAGAAGATGGCAATGTTGCAGAGATTGCTGAAGCAAAGCCAACTGTTAAAGGATTTAACTTTCTAGATGAAAGGATCATGAATGGGAATTGGGTTAACGAGCCTCACGCAAAAGTAATCCAAAACTTCTTAAGATTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGCAAAGTTTCATATGAAGCCGAATCACCAGATGAAGCAGCATTTGTGATTGCTGCTAGAGAACTTGGGTTTGAGTTCTATGAAAGGACACAGACGGCCATTTTACTGCATGAGTTTTATCCTCTATCTGGCAGGAAGGTTGAAAGATCCTACAAACTGTTAAACGTATTAGAGTTTAGCAGTGCAAGAAAGAGGATGTCGGTAATTGTAAGAGACGAGGACGGGAATCTACTACTATTGTGCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTTCAAAGAATGGAAGAGAGTTTGAAGAGAAAACTCGGGAGCACATTAATGAGTATGCTGATGCTGGTCTGAGGACATTGATACTTGCGTATCGTGAACTTGATGAGGAAGAATACAACCAATTTAACAAAGAATTCACAGAGGCCAAGAACATAGTGAGTGCAGATCGAGAGCAGACTGTAGAAGAAATAGCAGAGCAGATTGAGAAGGATCTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCAGAATGCATCGACAAGCTTGCACAGGCTGGAATTAAGCTCTGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGCTTACTAAGACAAGGGATGAAACAAATTATAATTAGCTCAGAAACTCCAGAAATCAAATCACTGGAGAAATTGGAGGACAAGTCTTCTGCTACTGAGGCAATTAAGGCAAGTGTTCTTCATCAGATACAAGAGGGGAATGCGTCATTATCTACGTCAGATGAAAATTCTGAGGCATTTGCTCTGATCATTGATGGTAAGTCTCTCACTTATGCATTGGAAGACGACGCGAAGGACTTGTTTCTTGAACTAGCCATTGGCTGCGCATCTGTCATATGTTGTCGTTCGTCTCCCAAACAAAAAGCACTTGTTACGAGGTTAGTTAAGACTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGGATGCTCCAAGAAGCCGACATTGGAATCGGTATCAGTGGCGTTGAAGGAATGCAGGCTGTAATGTCGAGTGACATCGCCATTGCCCAATTTCGGTTCTTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCGCATCCATGGTCTGCTACTTCTTCTACAAGAACATTACTTTTGGCTTCACCCTCTTCTTCTTCGAGATATATGCGTCGTTCTCCGGACAACCAGCCTATAATGATTGGTTTCTATCACTGTATAATGTATTCTTCACATCACTTCCAGTGATTGCCTTAGGAGTGTTCGATCAAGATGTCTCAGCAGAATTATGCGTCAAGTTTCCATTGTTATACCAAGAAGGTGTGCAAAATATTCTGTTCAGTTGGACTAGGATACTTAGTTGGCAATTCAACGGGGTGTTAAGTGCCACTCTGATATTCTTCTTCTGCATCGGTGCACTGGAGAGTCAAGCCTTCCGAAAAGGAGGTGAAGTCGTTGGGCTAGAAATCCTCGGCGCCGCCATGTACACTTGTGTAGTGTGGGTGGTGAATTGCCAAATGGCATTATCAATCAATTACTTCACTTTCATACAGCATATTTTCATCTGGGGCAGCATTCTATTCTGGTATATATTCCTTCTAGCTTATGGAGCCATGGATCCTACCATATCTACCACTGCTTATAAGGTCTTCATTGAAGCTTGTGCACCGGCACCTTCTTACTGGCTCGTCACTTTGCTGGTTCTTATTACATGTCTCATTCCATATTTCGCCTGTGCTTCAATAAAGATGAGGTTTTTCCCCTCATACCATCAAATGATACATTGGATCAGCAACGATGGCCAAGTACATGATCCAGAATATTGTAATGTGGTTCGGTCCAGATCCATACGCCACACGACCGTTGGTTTCACGGCTCGGTTCGAAGCGTCCAAATGGTTTGAAGAGAAGTCTGCAGAGAGCATCCCTTAA 3582 0.4082 MTGRRRKRHNFSRIHAFSCGKASFNGEHSLIGGPGFSRIVYCNDPERVEASLINYGDNYVRTTKYTLFSFLPKSLFEQFRRVANFFFLLCAILAFFPVSPWDSPFSSVFPLVFVVGLTMAKEILEDWRRKKQDIEMNNRKVKVHHGGAFDSTKWKDLKVGDVVKVEKDEFFPADLILLSSSYDDSICYVETTNLDGETNLKLKQALEETSKFQEDSSFENFKATIACEDPNANLYSFIGTMEMESQQYPLTPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSNIESRMDKIIYLLFCLLFVISFIGSVFFGIYTSEDLENGKMTRWYLRPDETTIFYDPKRAAIAAMLHFLTFLMLYGYFIPISLYVSIEIVKILQSFFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGYPLEEEEDGNVAEIAEAKPTVKGFNFLDERIMNGNWVNEPHAKVIQNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQTAILLHEFYPLSGRKVERSYKLLNVLEFSSARKRMSVIVRDEDGNLLLLCKGADSVMFERLSKNGREFEEKTREHINEYADAGLRTLILAYRELDEEEYNQFNKEFTEAKNIVSADREQTVEEIAEQIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSSATEAIKASVLHQIQEGNASLSTSDENSEAFALIIDGKSLTYALEDDAKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRIASMVCYFFYKNITFGFTLFFFEIYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAELCVKFPLLYQEGVQNILFSWTRILSWQFNGVLSATLIFFFCIGALESQAFRKGGEVVGLEILGAAMYTCVVWVVNCQMALSINYFTFIQHIFIWGSILFWYIFLLAYGAMDPTISTTAYKVFIEACAPAPSYWLVTLLVLITCLIPYFACASIKMRFFPSYHQMIHWISNDGQVHDPEYCNVVRSRSIRHTTVGFTARFEASKWFEEKSAESIP 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0673 1193 SFLD p-type atpase 406 911 IPR044492 -
Lele18g0673 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lele18g0673 1193 Gene3D - 525 696 IPR023299 GO:0000166
Lele18g0673 1193 Gene3D - 119 286 - -
Lele18g0673 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Lele18g0673 1193 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1144 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele18g0673 1193 SUPERFAMILY HAD-like 419 915 IPR036412 -
Lele18g0673 1193 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 826 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0673 1193 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 211 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0673 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 698 IPR023299 GO:0000166
Lele18g0673 1193 FunFam Phospholipid-transporting ATPase 117 286 - -
Lele18g0673 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 1149 - -
Lele18g0673 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1020 - -
Lele18g0673 1193 Coils Coil 117 137 - -
Lele18g0673 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1138 IPR023298 -
Lele18g0673 1193 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Lele18g0673 1193 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lele18g0673 1193 FunFam Phospholipid-transporting ATPase 696 900 - -
Lele18g0673 1193 SUPERFAMILY Calcium ATPase, transduction domain A 138 284 IPR008250 -
Lele18g0673 1193 Pfam E1-E2 ATPase 136 327 - -
Lele18g0673 1193 FunFam Phospholipid-transporting ATPase 538 696 - -
Lele18g0673 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 888 1139 IPR032630 -
Lele18g0673 1193 Pfam Cation transport ATPase (P-type) 519 623 - -
Lele18g0673 1193 SFLD Haloacid Dehalogenase 406 911 - -
Lele18g0673 1193 Gene3D - 697 900 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0673 Lele-ChrLele18 4050488 4055536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0673 10 1182 Primary Pumps ATPases AT1G68710 70.232 0.0 1782