Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0665 ATGATGAAAATGGACTATGGTGGTGGCTATTCCGGTAATGTGGTTCGCCTCTGTGATTCCTGGAGATTGTCCGCTTCCACGCTTTACTGTCACACCGATTCAGCGTACCTCTGTTCTTCCTGCGATGGACAAATTCACGCTCAAGGGTCTCCTTGTTGGGCCCACCATCGTGTGGAACTCTGCGGCGCGTGTGAGAAGGCTCCGGTGGCTTTCACCTGCAAGGCTGATGATGCTTCGCTGTGTGTCAACTGTGACTTTGAAATCCACTCTGCCAACCCAATCGCTAGCCGACACAAGAGAGTCCCTGCTTCTCCCGTGTCTCATATACTCAACGACAAAGTAGCAACTCCCAATGACCAGCCTAATGACGAGGTTGTCGATAACGACGACGACAACAACAACGTAAGTAGCAAGGAAATGGACGAGCGAGAAGCTGACTTGTGGTTACTGCTTGATTCTGCTGATACTATAGACAGCCAGGTTGATGATGGGTTTATGTTCGGACAAACAGAGGATGATCACCATGCGTACGTGGGGCTTGTTGAAGAGTGCGATTCATCCACTAAGTTCAAAAATTTCCAGGAAGATCATAAACAGGGGCAGCAAGCTTACAGCTTTTCTGAAGGGATGAACGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTGGAAGCTCAGCCTAAGAAGCAATTGCAGCCACAGCAGCAGCAGCAGAATATCTACTTCAATATGGAGAAGAAGCCATCAAGATCGGTGGCTTTCACTAATTACGCCTCGAATTGCCGGAGTGGCTGTTCCATATATATGGATGCTCAAATGCTGCAAAGAGGGACGACGAGCGGCATGCCAGCAGGGTACAGATTTGCCAAAGGAACAGAGATATTTGCAAGTGCTTCTTCCGTTCCAATGCAAATCCACTTTGGGGAGATGAACAGGAAAGCTGGAGTGGAAAAATACAGAGAGAAGAAGAAATCGAGAAAGTTCGAGAAGAGAATCAGATATGCTTACAGGAAAGCCTACGCTGAGAAACGACCCAGAGTTAAGGGCAGATTTGTTAAGAGACAGGACTTAACCTCAGATGAAGCTGTGCCTCTCTCCATTGAACATTTCAGCCATGGAAGCTTATCTATGTTAAGTCCTGCTGCAAAATATTAA 1152 0.474 MMKMDYGGGYSGNVVRLCDSWRLSASTLYCHTDSAYLCSSCDGQIHAQGSPCWAHHRVELCGACEKAPVAFTCKADDASLCVNCDFEIHSANPIASRHKRVPASPVSHILNDKVATPNDQPNDEVVDNDDDNNNVSSKEMDEREADLWLLLDSADTIDSQVDDGFMFGQTEDDHHAYVGLVEECDSSTKFKNFQEDHKQGQQAYSFSEGMNESDSVVPVQSVEAQPKKQLQPQQQQQNIYFNMEKKPSRSVAFTNYASNCRSGCSIYMDAQMLQRGTTSGMPAGYRFAKGTEIFASASSVPMQIHFGEMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKRQDLTSDEAVPLSIEHFSHGSLSMLSPAAKY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0665 383 ProSiteProfiles CCT domain profile. 311 353 IPR010402 GO:0005515
Lele18g0665 383 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Lele18g0665 383 SMART bboxneu5 56 103 IPR000315 GO:0008270
Lele18g0665 383 SMART bboxneu5 13 51 IPR000315 GO:0008270
Lele18g0665 383 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Lele18g0665 383 MobiDBLite consensus disorder prediction 208 235 - -
Lele18g0665 383 MobiDBLite consensus disorder prediction 112 141 - -
Lele18g0665 383 Pfam CCT motif 311 353 IPR010402 GO:0005515
Lele18g0665 383 Pfam B-box zinc finger 59 102 IPR000315 GO:0008270
Lele18g0665 383 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 360 IPR045281 GO:0009909
Lele18g0665 383 CDD Bbox1_BBX-like 60 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0665 Lele-ChrLele18 4004342 4006160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0665 11 353 C2C2-CO-like Transcription Factor Family AT3G02380 39.943 8.31e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele18g0665 zf-B_box 2.5e-06 No_clan