Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0649 ATGAGTGTCGGAGCTTGTCGTGTAGTGGGGCCTGTCTCAAAGTGGGCTTCTTTGCTTTCTCATGCTGAAATGGAGTCTTGGAGTTATGATTCTGAAGAAAAAGGGTTTGTGTCTAATGATACACTCTCACCTCCTAATTCACTTTCCAGAAGTAAAGGTTCCATCTTGGGATGGGAATTGAAGAGTCCCTCTGGAATTTCCAGCGACATGTTATCCTCGGGTCAACCAAACTTAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGTAAACAATTGTCCGATGATCCAATTAGCACTGTGTCCAACAGAAAGCTCGAAGGTGGGCCTTTTATGACTGCTGCCCCAATTGCGATTTCTGGAGTTGAAGACTCCAATTCGAAGCTTTCTAACTCCGTGGTTGAATCTAACGGTCGAGATTCACTCATTGATTTGAAGCTGGGACGATTTGGCGATCCCAGAGAAGCCATGGATTCAGCATTCTCCAGAGGAACCCCTATTTTGTCTTCAGAATCATCGGCTCCGACCAAGAGGGCACGAGGTTCGGGGGTTCATTCACAAACCGCGTACTGTCAAGTTTATGGGTGTAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCACAAAGTTTGCGAGGCTCACTCCAAGACTTCCAAAGTTATAGTCAACGGCATCGAACAAAGATTTTGTCAGCAATGTAGTAGGTTTCACTTGCTTGCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAACGAGCGCCGGCGAAAGCCACAAGTTGGTATTCACTCTGGAAAGGCTGGAAGATTGCTTCAGTCATACAGTGATGGTAGATTCCAGAGCACCATGCTAACAACTGCATCTTTTATCTGCCAAGAGATACTTCCTACCGGGACTTTGCGCTCTGATAAATATGGAACGAATGACTGGTGGAGACCTATAAATAATGAAGATGGGACTGATTTTGGGCATCTTCCTGCTGTTCCTGTCACAAATGGACACCCTCACTCAAGATCTCTATTCCATCCGTTTAATGAAAGGCAATTTCCTTTTCTTCATGAAAATGGCGCTACATCCAGTACCGGAAGCATCTTCTGTGAGAACAACAGCCAGTATCCACCTCCTGTCATGGGTCCAAATTCTGGGGCACAATCTTTATTCCAAGACACTTCCTTAAGAAGGGAGGACTTCAATGTTTATGATGCTACATCGGCAATTCAGGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAGCTCTTCAAGCCACTCATTAGGAATCCCCATGGCTCGCCCCTTGGTCGTTCCAAGCAGTAGCCATAGTAATTACAGGCCGAGTCAGCTCACCGAGAAACTCATAGGAATGAACTCACAGGCTTCTACAAGTGCAGGAGTTTCAGATAGGTTTCGATCCGAGATGAATCCTGCCACCACCGATGGAAGTCATCTTAGTCCTGTACTGATACCAGACAATAGTAACATTCTCCATTTTGAAATGGCAGATGGGATGTTCCAAGGGCCAGGTTTTGTGAACATGAAAGACGGTCTTTCATGTGAAGATGGCCCAACCATTGACTTGCTTCAACTATCATCACAACTTCAGCGAGTTGAGCATCAGAGGCAATCGTCGCAGGTGAAGCGAGAAAATGATTCTTCCTCCTGTCTTCGGACTACTTAA 1734 0.4591 MSVGACRVVGPVSKWASLLSHAEMESWSYDSEEKGFVSNDTLSPPNSLSRSKGSILGWELKSPSGISSDMLSSGQPNLGNQGFEEMGFPEMLGKQLSDDPISTVSNRKLEGGPFMTAAPIAISGVEDSNSKLSNSVVESNGRDSLIDLKLGRFGDPREAMDSAFSRGTPILSSESSAPTKRARGSGVHSQTAYCQVYGCNKDLSASKDYHKRHKVCEAHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQSYSDGRFQSTMLTTASFICQEILPTGTLRSDKYGTNDWWRPINNEDGTDFGHLPAVPVTNGHPHSRSLFHPFNERQFPFLHENGATSSTGSIFCENNSQYPPPVMGPNSGAQSLFQDTSLRREDFNVYDATSAIQGLSGVSDSGCALSLLSSQSQSSSSHSLGIPMARPLVVPSSSHSNYRPSQLTEKLIGMNSQASTSAGVSDRFRSEMNPATTDGSHLSPVLIPDNSNILHFEMADGMFQGPGFVNMKDGLSCEDGPTIDLLQLSSQLQRVEHQRQSSQVKRENDSSSCLRTT 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0649 577 MobiDBLite consensus disorder prediction 557 577 - -
Lele18g0649 577 MobiDBLite consensus disorder prediction 161 185 - -
Lele18g0649 577 SUPERFAMILY SBT domain 192 272 IPR036893 GO:0003677|GO:0005634
Lele18g0649 577 Gene3D - 184 255 IPR036893 GO:0003677|GO:0005634
Lele18g0649 577 Pfam SBP domain 194 267 IPR004333 GO:0003677
Lele18g0649 577 MobiDBLite consensus disorder prediction 166 185 - -
Lele18g0649 577 ProSiteProfiles Zinc finger SBP-type profile. 191 268 IPR004333 GO:0003677
Lele18g0649 577 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 56 564 IPR044817 GO:0003677
Lele18g0649 577 MobiDBLite consensus disorder prediction 475 504 - -
Lele18g0649 577 FunFam Squamosa promoter-binding-like protein 14 185 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0649 Lele-ChrLele18 3888017 3892660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0649 24 310 SBP-box Gene Family AT1G69170 40.070 1.73e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele18g0649 SBP 1.6e-31 No_clan