Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0644 ATGGAGACGGCAATGGTGGCAAGCGTCGCAGCGAGAAGAAGCCTCTGGCGTATCCTCCAATGTCGCGCCCATTGCTTTTCAACGGTTTCCAGTTCTATCGACCGATTTCATCCAAAATTCTCTCAGCAATCTCAGTACAGGAAAGAGATTTCACTTGCCAATCTCTTCCAAAGGTACGGGTTCCCACCATCACAGATTCAAGGTTTTCTCGCAAAGAATCGTTTTCTGTTGAATTCCAATTTACAAGAGTTAGAGAAGTGTCTGGCTACTCTATTATCATTCAGGATTCCGCAAAGCTCTCTCATTTCTCTGCTACGCGATTGTCCTGGCATATTGGAACACTATTATCTCAAGAAATGGGAAGCATGTTTCTCACAACTGCACGTTTTGACTCCTTCCCCACTTATGATCAGAAATTTCTTGCAATACTCTCGGAGGTATCAGCTAGACCCTGCTGAACTTCCAAAAAGCATTGAGATCTTTAGGGGTTCAGGCTTTACGCATGTTGCTATAGCTCGGGTTTTCGAGGACTTTCCTACTGTAGTCGTGATGACTAAGGGAGAAATTCTTTCTATAATTGAATTTCTCATTGAAATTGGGGTTCCCAGGGACAAGATTGATCGAGTCATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATCGAAGACCGGTTGAAGCCGTTGCTCTGTGAGTTGAGCGATTTGGGATTTTCTGATGATGAGATTATAAAAGAGATAATAAGGGAGCCCAATATTCTTGGAATGGAACTAGGGGAATTTTCACGATGTTTACAATTGCTCAAGACTTTGAAATGTAGAGAAGCGATCAAAGAGAAGATTTTCCAAGAGGGTATGCTGAGAGCTGGTTTTGAAGTAAAATTGAGAGTAGATTGCTTGTGCAGTCACGGTTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACATATGACTTAGAGAACATTGAAAAGAAGATTGACTTTTTAGTGCACAGAATGGAATGTAGTGTTGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAGAAGCAGATTGTTCCTCGACACAGTGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGTAGACTTAGATTTTACAACCTATATGTCAAGCCCTACCCAGAATGTGAAAAATTGTACGGGAGATTTTCAAGAAATGTTGAAGTTAAAAGCAAGCATCCAACTGGACTCTGGAAAATCTTTAAACCACAAAAGTTCCCTGAAACCAACGAAGATGTGAAGAACATGAAGTCCTTTATGGACGGAGTAGTGTAG 1359 0.4099 METAMVASVAARRSLWRILQCRAHCFSTVSSSIDRFHPKFSQQSQYRKEISLANLFQRYGFPPSQIQGFLAKNRFLLNSNLQELEKCLATLLSFRIPQSSLISLLRDCPGILEHYYLKKWEACFSQLHVLTPSPLMIRNFLQYSRRYQLDPAELPKSIEIFRGSGFTHVAIARVFEDFPTVVVMTKGEILSIIEFLIEIGVPRDKIDRVISLHPRVLGLGIEDRLKPLLCELSDLGFSDDEIIKEIIREPNILGMELGEFSRCLQLLKTLKCREAIKEKIFQEGMLRAGFEVKLRVDCLCSHGLIRRDAFKVLWKEPRLITYDLENIEKKIDFLVHRMECSVDCLPDVPEYLGVNFEKQIVPRHSVMEYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPYPECEKLYGRFSRNVEVKSKHPTGLWKIFKPQKFPETNEDVKNMKSFMDGVV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0644 452 Pfam mTERF 141 262 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 Pfam mTERF 294 393 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 PANTHER CGI-12 PROTEIN-RELATED 40 401 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 342 376 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 67 97 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 SMART mt_12 310 341 IPR003690 GO:0003690|GO:0006355
Lele18g0644 452 Gene3D Transcription termination factor 3, mitochondrial 185 414 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0644 Lele-ChrLele18 3862944 3864302 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele18g0644 mTERF 2.4e-16 No_clan