Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0632 ATGTCTCCGGTTTCGGCTTCCTTACAAGGGAAGATTAGAGGGATGGCTTTCTTTGGTAGAGTTGGGAATATACTAAGACAGGCTGCAAATAAGCAGCTCAGTTCAGAATTACGTTCAGCCTCATCTATTTTCCAGGCTATACGGTGCATGTCATCTGCTGCAAGTTCAAGGGTGTTTGTAGGAGGACTGTCGTATAACACTGATGAGCAAAGTTTGAGGGAAGCTTTTGCGAAATATGGTGAAGTAGTTGATGCAAGGGTAATTATGGATCTTGAGACTAATAGATCTAGAGGGTTTGCCTTTGTCACTTTCACATCAGTTGAGGAGGCATCAAGTTCCATTCAGGCCTTAGACGGACAGGATCTTGATGGTCGTCGAGTTCGGGTAAATTATGCTAATGAGAGGCCTCGATATGGTGGTGTTGCTGGTGCTGGCTATGGAGGCGGTTATGGTAATTCTCTCTATGGTGGTTCTGGTGCATATGGTGGCAATGCTGCAGGAGGTTATGGTGGTGGCGGATATGGATCAGGTGACAGCACAGGAAATAACTATGCTTCTAACAATTTTGGAGCCGGAGCTGCAGGTAGCAGTTATGGAAATGATGGTAACTTTGCGAGTGGAACCCCTTATGGTGGTGGAAGTGATGGAGGATATGGTGGTATCAGTGGAAGTGGAACTACTGCTGACAGCTTTGGAACTGGAAGTGCTGTTGGTGGCTTTGGCGGAAGCAATTATGCAAATGATGGGAACTTTGCGAGCGGAAGCCCTTATGCTGGTGGCAGCAGTGGAGGATATGGCAGCAACAGCGGAAACTTTGGTGTTGCTGGTGGTGGTGGAGGTAGTGATAACTATGGGAGTGCTCCTAGTTTTGGTGCTGCTGGGGGTGGTGGCAGTGATAGCTTTGGTGGTTCGGCTGATTTTGGTAGCAGTGGTGGTCCAGGTTCAGGCAGCGGCTTTGCTGGTGGATACAATGGAGGCATCGGCAGCAGTGGTCAATTGGATGGCAAAGAAAGCGACAATACAGGTCAGGATATTGGAGATTTTGGGGGCACACTAGAGGAAAACTTCCGGGATGATGATGCTGGTAATTTTGCCAAAAGGGCTTGA 1107 0.4815 MSPVSASLQGKIRGMAFFGRVGNILRQAANKQLSSELRSASSIFQAIRCMSSAASSRVFVGGLSYNTDEQSLREAFAKYGEVVDARVIMDLETNRSRGFAFVTFTSVEEASSSIQALDGQDLDGRRVRVNYANERPRYGGVAGAGYGGGYGNSLYGGSGAYGGNAAGGYGGGGYGSGDSTGNNYASNNFGAGAAGSSYGNDGNFASGTPYGGGSDGGYGGISGSGTTADSFGTGSAVGGFGGSNYANDGNFASGSPYAGGSSGGYGSNSGNFGVAGGGGGSDNYGSAPSFGAAGGGGSDSFGGSADFGSSGGPGSGSGFAGGYNGGIGSSGQLDGKESDNTGQDIGDFGGTLEENFRDDDAGNFAKRA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0632 368 MobiDBLite consensus disorder prediction 351 368 - -
Lele18g0632 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 134 IPR000504 GO:0003723
Lele18g0632 368 MobiDBLite consensus disorder prediction 296 368 - -
Lele18g0632 368 SMART rrm1_1 57 130 IPR000504 GO:0003723
Lele18g0632 368 SUPERFAMILY RNA-binding domain, RBD 55 164 IPR035979 GO:0003676
Lele18g0632 368 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 26 160 - -
Lele18g0632 368 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 128 IPR000504 GO:0003723
Lele18g0632 368 Gene3D - 23 151 IPR012677 -
Lele18g0632 368 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0632 Lele-ChrLele18 3787209 3789857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0632 58 136 Eukaryotic Initiation Factors Gene Family AT4G34110 39.241 4.01e-11 62.4