Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0610 ATGACTGAGCCTCTGCTTCTAAACTCCGTTCTCCCACCTCAACAAAGACAAGTCGATTCCTCTTCTCACGTGCACACCCTCCCTCCGGTCCCCATGTCTAATTTTGAGGTTGCAGAGCTAACCTGGGAAAACGGCCAGCCAGTCATGCATGGGCTTAGTGGGCTCCTACCAACGGCCCAGCGAAATCTCACATGGCTCGGGGCCCATGAAACTCTGGACTCCATTGTTCATCAAGCTACTTGCCAACGTCAAAAGTCAAATTTCATGATGATGCCTCACGATCATACTCCAACCGGTATAAGCTCCACCGTTGCACCCTCCGGCAAGACAGCAATGCCGCCTGAGAGATCCGGCCAGGCACTATCGGAGCCAAAGCTGGCGAGGAAGCGGGTTCGGTCGGATTCCGGCTATCTTGGCAACGGTTTAGAAGAATGTGAACCCAGTAGTGGAGGTTGTGCCAGTGTTAGTGCCACATTCTGTAGGAGCTTCAAGAGAAGTAAAACACTTGAGGATGATTCTCCTTCTCTCTGTGAATCGGAAAACCAAGACCAAGAAGAAGACAGAGACACCAAGGAAGAAACAGGCCGTTCCAACTCAACAAGAAGAAATCGAGCAGCCGCGATCCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAGAGGTTGGTGCCCAACGCCAGCAAGAATGACAAAGCTTCAATATTAGACGAAGTGATTGAATACTTAAAGCAGCTGCAAGCACAGATACAGATGATGAGTATGAGAAACATGCCTCAGCAGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGATGGCCAGAATGGGGCTTGGGCTGGGCTCGGGCTCGGCCCAAGGCCTAGGCTTGGCCGGCCTGCTTAACACCAACACCACCATGGCTGCACGCCCACCAGTTCTTGCTTCTCTTCCACAACTCACAGTTGCAGCAGCTCCTACTATTACTCCTTCCTTCATGATGTCTCCATTTGTTCAAGCCCATGCTCCTCCTCCTCCAAAGCCTGAACCTGCATCTGCAGCCACCTCCAATGTCTCAGTTTCTTTGCCTGATCCTTATGCCACTTTTCTTTCACAAGTATTCAGTGAATATGGATATTCTGAGCAACATGGCGGCGCTTTACCGGCAGCAGATGAGACAGAACAATCAGAACATGAGCGGCCTGTCCCAACAACAACATCATGGACAAGGGAATTGAGAAGAAAAGAAACCAGAAATGCTGCTTCTGAGTGA 1278 0.4977 MTEPLLLNSVLPPQQRQVDSSSHVHTLPPVPMSNFEVAELTWENGQPVMHGLSGLLPTAQRNLTWLGAHETLDSIVHQATCQRQKSNFMMMPHDHTPTGISSTVAPSGKTAMPPERSGQALSEPKLARKRVRSDSGYLGNGLEECEPSSGGCASVSATFCRSFKRSKTLEDDSPSLCESENQDQEEDRDTKEETGRSNSTRRNRAAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDEVIEYLKQLQAQIQMMSMRNMPQQMMMMMQQQLQMSMMARMGLGLGSGSAQGLGLAGLLNTNTTMAARPPVLASLPQLTVAAAPTITPSFMMSPFVQAHAPPPPKPEPASAATSNVSVSLPDPYATFLSQVFSEYGYSEQHGGALPAADETEQSEHERPVPTTTSWTRELRRKETRNAASE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0610 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 273 IPR036638 GO:0046983
Lele18g0610 425 Coils Coil 210 237 - -
Lele18g0610 425 SMART finulus 210 259 IPR011598 GO:0046983
Lele18g0610 425 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 37 379 IPR031066 -
Lele18g0610 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 204 253 IPR011598 GO:0046983
Lele18g0610 425 MobiDBLite consensus disorder prediction 102 131 - -
Lele18g0610 425 MobiDBLite consensus disorder prediction 383 425 - -
Lele18g0610 425 Gene3D - 199 264 IPR036638 GO:0046983
Lele18g0610 425 MobiDBLite consensus disorder prediction 411 425 - -
Lele18g0610 425 MobiDBLite consensus disorder prediction 169 219 - -
Lele18g0610 425 CDD bHLH_AtPIF_like 204 264 - -
Lele18g0610 425 Pfam Helix-loop-helix DNA-binding domain 209 254 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0610 Lele-ChrLele18 3644533 3647366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0610 26 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 40.052 1.92e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele18g0610 HLH 1.4e-14 No_clan