Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0606 ATGTCTGAGCATGTAACAGATTCCTTCGGCTTACTATTAATCTGTTCCTTAATCCTTTTCTCAGCGGGTAAAATAGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTTTTGCTTCAGCTTAAATTATACCTCAACAATCAAACTCTAGTAGACCAAGGACGATACACAAACTGGAACACGACAAATTCGAATCCTTGTGAATGGTCGGGAATCTGGTGCAGCGGCGGCAATGGAACAGCAACAACGAGGAGGAGGGTGGTCGGAGTCGACCTCTCCGACAACAAAATCAACGGCGGGATATTCCAGAACTTCTCTCAGCTCACTCATCTCACACACCTTGACCTTTCCCGGAACACACTCTCCGGCGAGATTCCGGCGGACTTGAGGCGGTGCAAAAAGCTCGTGTATCTCAATCTCTCCCACAATATTCTTCCCGAAGAGTTGAATTTAATCGGCTTAACAAACCTACAAACTCTTGACTTATCAGGCAACAGGCTTCATGGCGATCTTGGGTTGAATTTCCCAGCCATTTGTGACAATCTGATCAGTTTGAATATCTCAGGGAATAACTTCACTGGTAGGATCGATGAATGCTTCGATCAGTGTTCGAAATTGCATTACTTGGATTTGAGCACTAATAAGCTGAGTGGGGATATATGGATGGGAATTGCGAAGCTGAGAATGTTTTCCGTTTCAGAGAATTTTCTCAGCGGGGAAATTCCTCCGTCAGCTTTTCCGGCACAGTGCAATCTTCAAGTTCTTGACATTTCAGAAAACACGTTCACAGGGAATGTTCCTGAGGAGCTTTCTAACTGCAAGGATTTAACGATTCTGAATCTCTCTAGCAACATGTTAAACGGATCAATACCTAAAGAAATTGGTTCAATTTCTGGGATTGAAGCATTGTATTTGGGGAACAACAGTTTCTCAAGAGATATCCCAGAAGAACTCTTGAACTTGACCAATTTGACATTCTTGGATTTAACTAGAAACCAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTATCTTCTTTTACACTCAAATTCTTACACTGGAGGATTATCTTCATCGGGAATTCTCAAATTACCAAACATTTTACGCTTAGACCTAAGCTACAACAATTTCTCAGGTCCATTACCCTCAGAAATCTCTCAAATGTCAAGCCTCAAATTATTAATGCTAGCCTACAATCAATTCAATGGATTTATTCCATCTGAATTTGGAAATTTGCCTCATCTTCAAGCTCTTGACTTATCATTCAACAACTTATCTGGGCCAATTCCACCAGCTCTTGGAAACTTAACCTCCCTTTTATGGCTCATGCTTGCGAGTAATTCATTAACAGGTAAAATCCCAAGAGAGCTGGGGAACTGTTCGAGCTTATTATGGCTGAATCTTGCAAATAATAAACTCACAGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAACGCCATGGTCACATTTGAATCAAATAGGCAATATGATACAGTTAGTGCTGGTTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCGTTTAGTTTTGTTTATGACATTCTTACGAGGCAGAATTGCAGAAGAATTTGGGACAGATTGCTTAAAGGGTATGGGATTTTCCCGATTTGCAGTGCAGGTTCATTTTCATCAATGTCTCAAATCTCTGGTTATGTTCAGTTAAGTGGGAACCAACTCTCAGGGGAAGTTCCTCCGGAAATTGGAACGATGCAGAACTTGAGCATGTTGCATTTAGGGCTTAATAAATTTTCTGGGAACCTGCCTGTAGAGGTGAAAAATATGCCGCTTGTGGTGTTGAACATAACAAGAAACGAGTTTTCTGGGGAAATTCCTAGGGAAATTGGAACCATGAAGTGTTTACTGAACCTTGATCTCTCCTACAACAATTTTTCTGGGGTTTTTCCTTCAAGTTTGAACAGCTTGACAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATTTCAGGTGAGATTCCATCGTTAGGACAACTAGCTACGTTCGAGAAAAACTCATATTTGGGGAATCCCCTTTTGGATCTTCCAAGTTTCATCGACAACCCCACCGATCATCAGAAAAACACGACCATTCGTAACAGAGCCATAAAAAAATCCATGAATCTCTCTGTTTTCATGGCATTCTTTGCTCTCATTCTGGCTTTCTTAGTATTTGGTCTTCTTACTATCATAGTCTGTTTGCTGATAAAAACCCCGTCGGAAGAACCACTCCTGAGAGACATAAAACTCGACCATGAGTCTGGAACCTCGTCCCCGTGGTTGTCGGACACAGTTAAGGTTATTCGATTGGACAGGACAGCTTTCACACACGCCGACATCTTGAAAGCCACCGGAAACTTCTCAGAGGACAGAATCATAGGCAAAGGAGGATTCGGAACGGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAACTCCAAAGAGAAGGACTTGAAGGCGAAAAGGAATTCAGAGCAGAAATGGAAGTCCTAAGCGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTCAGAAAAAATACTGGTTTACGAATACATTTCCGGTGGAAGCTTAGAAGATCTCGTAACCGACAGATTAAAATTCACTTGGAGACGACGGCTAGAAGTAGCCATTGACGTTGCTCGAGCCTTGGTTTACTTACACCACGAATGTTACCCTTCAATCGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAAAAAAACAGGGAAGGCCAAAGTTACGGACTTTGGACTAGCCAGAGTGGTTGACGTCGGAGACAGCCACGTCAGCACGATGGTGGCAGGGACGGTGGGGTACGTGGCGCCGGAGTACGGCCACACATGGAAGGCGACGACGAAAGGGGATGTGTACAGTTATGGAGTGTTGGCTATGGAGTTGGCGACTGGAAGAAGAGCATTGGACGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGGGTCACGGAAGAAATAGGCGCCGGCCGGTGATTCCGGTGGCGCTGATGGGTTCTGGTTTACTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGGATAGGGGTGAGATGCACGGCGGAGACACCGCAGGCTCGGCCGACGATGAAGGAGGTTTTGGATATGCTGATCAAGGTGTATAACCCCAAGGGCGATTCAAGCTATGAACATCTGAGTCATTAA 3291 0.4427 MSEHVTDSFGLLLICSLILFSAGKIVAGDSLDTDREVLLQLKLYLNNQTLVDQGRYTNWNTTNSNPCEWSGIWCSGGNGTATTRRRVVGVDLSDNKINGGIFQNFSQLTHLTHLDLSRNTLSGEIPADLRRCKKLVYLNLSHNILPEELNLIGLTNLQTLDLSGNRLHGDLGLNFPAICDNLISLNISGNNFTGRIDECFDQCSKLHYLDLSTNKLSGDIWMGIAKLRMFSVSENFLSGEIPPSAFPAQCNLQVLDISENTFTGNVPEELSNCKDLTILNLSSNMLNGSIPKEIGSISGIEALYLGNNSFSRDIPEELLNLTNLTFLDLTRNQFGGDIQEIFGKFKQVKYLLLHSNSYTGGLSSSGILKLPNILRLDLSYNNFSGPLPSEISQMSSLKLLMLAYNQFNGFIPSEFGNLPHLQALDLSFNNLSGPIPPALGNLTSLLWLMLASNSLTGKIPRELGNCSSLLWLNLANNKLTGKFPPELANIGRNAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRQNCRRIWDRLLKGYGIFPICSAGSFSSMSQISGYVQLSGNQLSGEVPPEIGTMQNLSMLHLGLNKFSGNLPVEVKNMPLVVLNITRNEFSGEIPREIGTMKCLLNLDLSYNNFSGVFPSSLNSLTELSKFNISYNPLISGEIPSLGQLATFEKNSYLGNPLLDLPSFIDNPTDHQKNTTIRNRAIKKSMNLSVFMAFFALILAFLVFGLLTIIVCLLIKTPSEEPLLRDIKLDHESGTSSPWLSDTVKVIRLDRTAFTHADILKATGNFSEDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRLKFTWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRRRPVIPVALMGSGLLEGMEEMVELLRIGVRCTAETPQARPTMKEVLDMLIKVYNPKGDSSYEHLSH 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0606 1096 Gene3D Ribonuclease Inhibitor 552 715 IPR032675 -
Lele18g0606 1096 SMART LRR_typ_2 154 185 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 321 344 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 370 394 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 418 441 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 108 132 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 637 660 IPR003591 -
Lele18g0606 1096 SMART LRR_typ_2 442 466 IPR003591 -
Lele18g0606 1096 Pfam Protein kinase domain 807 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0606 1096 CDD STKc_IRAK 812 1081 - -
Lele18g0606 1096 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Lele18g0606 1096 SUPERFAMILY L domain-like 571 701 - -
Lele18g0606 1096 SUPERFAMILY L domain-like 226 485 - -
Lele18g0606 1096 SUPERFAMILY RNI-like 87 291 - -
Lele18g0606 1096 Gene3D Phosphorylase Kinase; domain 1 774 885 - -
Lele18g0606 1096 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 250 1081 - -
Lele18g0606 1096 Gene3D Ribonuclease Inhibitor 247 341 IPR032675 -
Lele18g0606 1096 Gene3D Ribonuclease Inhibitor 177 246 IPR032675 -
Lele18g0606 1096 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Lele18g0606 1096 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Lele18g0606 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Lele18g0606 1096 ProSiteProfiles Protein kinase domain profile. 806 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0606 1096 SMART serkin_6 806 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0606 1096 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Lele18g0606 1096 Pfam Leucine rich repeat 392 431 IPR001611 GO:0005515
Lele18g0606 1096 Pfam Leucine rich repeat 155 216 IPR001611 GO:0005515
Lele18g0606 1096 Pfam Leucine rich repeat 90 143 IPR001611 GO:0005515
Lele18g0606 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Lele18g0606 1096 Gene3D Ribonuclease Inhibitor 342 519 IPR032675 -
Lele18g0606 1096 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 886 1087 - -
Lele18g0606 1096 Gene3D Transferase(Phosphotransferase) domain 1 886 1093 - -
Lele18g0606 1096 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Lele18g0606 1096 PRINTS Leucine-rich repeat signature 154 167 - -
Lele18g0606 1096 PRINTS Leucine-rich repeat signature 111 124 - -
Lele18g0606 1096 SUPERFAMILY Protein kinase-like (PK-like) 790 1080 IPR011009 -
Lele18g0606 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 506 - -
Lele18g0606 1096 FunFam serine/threonine-protein kinase BRI1-like 2 767 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0606 Lele-ChrLele18 3619134 3622635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0606 48 1087 Receptor kinase-like Gene Family AT4G39400 33.566 1.88e-157 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele18g0606 Pkinase 7e-45 CL0016