Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0591 ATGGAAAACGTTGTGGGATTCTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGATTTCGGTTTCATCCAACTGATGAAGAGCTTATAAGCCATTACCTGTACAAGAAGGTTACTGATTCAAGCTTCTCAGCCAGGGCCATTGGGGAGGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCAATGAAAGCCAAAATGGGAGAAAAAGAGTGGTATTTCTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACTGGGAAAGATAAAGATATTTACAGAGGAAAATCGCTGGTGGGAATGAAGAAAACTCTGGTTTTCTACAGAGGACGAGCACCCAAAGGAGAGAAGACCTACTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCTGTCCACAACCTCCCTAAAACCGCAAAGAATGAGTGGGTGATTTGCAGGGTTTTTCAAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGAAATGAATTGGGTTCTTCTGGTTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAACAAAATCAAACCTGTCCCAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGTTCAGAGAACCAACAACCAAGGAGGGATCTTTGATTCCTACAGAAACTTCCCTAATTATGGGGTTTCTTCGAATCCCTCAGACCCCCTCCCCAGAATCCCACTTTCTGCTGGTTCGTTATATTCCGCTCAACCAAATCAAGCTCCTTCTAGTTTAGCTTTACCCAGTTCTATTTATGGCCTGAAAGACCAGACCCTGCTCAGAGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGGGACATGGTCAGTGTGTCTCAAGAAACAGGCCTTACTACTGACATGAACCCAGAAATCTCCTCGGTCCTGTCGAATCTTGATATGAGTCGAAAAACCTTTGACAATCAGCAGCAGCAGCAGCAGCAACTGGCTGCTTCATCTGCAGCAATGGAGTACGACGGTTTGTGGATTTACTCAGTTCAGATTTAA 1116 0.4498 MENVVGFCKEEEKMNLPPGFRFHPTDEELISHYLYKKVTDSSFSARAIGEVDLNRSEPWDLPMKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKDIYRGKSLVGMKKTLVFYRGRAPKGEKTYWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKIKPVPESAYVPCFSNPIDVQRTNNQGGIFDSYRNFPNYGVSSNPSDPLPRIPLSAGSLYSAQPNQAPSSLALPSSIYGLKDQTLLRALLENQESNRNNFKPERDMVSVSQETGLTTDMNPEISSVLSNLDMSRKTFDNQQQQQQQLAASSAAMEYDGLWIYSVQI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0591 371 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Lele18g0591 371 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lele18g0591 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 315 - -
Lele18g0591 371 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Lele18g0591 371 FunFam NAC domain-containing protein 100-like 25 170 - -
Lele18g0591 371 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0591 Lele-ChrLele18 3542438 3543758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0591 14 367 NAC Transcription Factor Family AT5G07680 56.742 7.71e-126 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele18g0591 NAM 2.1e-39 No_clan