Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0581 ATGTTTTGTCTCTGGATTAAAGAGGGATTTGTTGTTCGGAATCGAGCGATGAAGAAGAGACAGGTGGTCGTGAAGAGAGATGTCGCCAAGACTTCGTCGTCGGTCATAAGGAATGTCAGATATTTGGAGTGTCAGAAGAATCACGCCGCCAACATAGGAGGCTACGCCGTCGATGGTTGTAGAGAGTTCATGGCCAGTGGTGATGACGTCACTGCCGGAGCTCTTACCTGTGCTGCTTGCGGCTGTCACAGGAATTTCCACAGAAGAGAAGTTCAGACTGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA 321 0.4953 MFCLWIKEGFVVRNRAMKKRQVVVKRDVAKTSSSVIRNVRYLECQKNHAANIGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0581 106 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 94 - -
Lele18g0581 106 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 40 91 IPR006456 -
Lele18g0581 106 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 41 90 IPR006456 -
Lele18g0581 106 Pfam ZF-HD protein dimerisation region 38 91 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0581 Lele-ChrLele18 3464335 3464981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0581 17 104 Zinc finger-homeobox gene family AT1G18835 78.652 2.60e-43 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele18g0581 ZF-HD_dimer 1.3e-29 No_clan