Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0580 ATGTATGTAATGGGAAGACCACCTTGCTGCGACAAAATTGGGATCAAGAAGGGCCCTTGGACTCCCGAAGAAGACATCATTTTGGTCTCTTATATTCAAGAACATGGACCTGATCATGTCCAACTTATCGATTTTGGTGTGAATTTCAGATGGGCTGCGATAGCTTCTTATCTTCCACAGAGGACTGACAATGACATAAAGAATTATTGGAACACCCATTTGAAGAAGAAGCTGAAAAGGCTACAAACTGGGAGTGAGGGTGACGACCAAGAAGATGAGTCGGTGGCACAGCCCAAGGGCCAGTGGGAGAGAAGGCTTCAGACAGATATCCACATGGCCAAACAGGCTCTGCGCGAGGCTCTGTCCCTCGACAAGCCAACCAAAACTGAAACCGAAACCGAAACAGAAAACGAAAACAAGCCCTCTAATCCCACAATCCAAACATCCCCTTACGCATCAAGCACCGAAAACATAGCCCGATTACTCCAGAACTGGATGAACAAATGCCCAAAGGACCCAACACAACAACCAAATTCACCAGAAGGAGCTCGCTTCATCAACACAGGTTCCAGTTCTTCGAGCGAAACGGCGACGTATAGTAACAACAATGTTCTAGATTCTTTATGGAGCTTCAACTCTGATACTTCACAACAATCTGTGTCTGTGGACGACAACGCCAACAACAACAGCATGTTCCAAGACGAAAGCAAGCCGACGAGCTCGGAGTTGCGTCAGCTTCCTCTGACTCTAATCGAGAAGTGGCTCTTGTTCGACGACGGCGTAGCTCAGAACCAGGATGACCTAATCAACGACTCGCTCATGGAAGAAACCACTCCACAATTGTTGTAG 849 0.4723 MYVMGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPDHVQLIDFGVNFRWAAIASYLPQRTDNDIKNYWNTHLKKKLKRLQTGSEGDDQEDESVAQPKGQWERRLQTDIHMAKQALREALSLDKPTKTETETETENENKPSNPTIQTSPYASSTENIARLLQNWMNKCPKDPTQQPNSPEGARFINTGSSSSSETATYSNNNVLDSLWSFNSDTSQQSVSVDDNANNNSMFQDESKPTSSELRQLPLTLIEKWLLFDDGVAQNQDDLINDSLMEETTPQLL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0580 282 Gene3D - 15 80 - -
Lele18g0580 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 78 IPR017930 -
Lele18g0580 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 50 212 - -
Lele18g0580 282 MobiDBLite consensus disorder prediction 118 152 - -
Lele18g0580 282 SUPERFAMILY Homeodomain-like 3 85 IPR009057 -
Lele18g0580 282 CDD SANT 19 74 IPR001005 -
Lele18g0580 282 MobiDBLite consensus disorder prediction 81 104 - -
Lele18g0580 282 ProSiteProfiles Myb-like domain profile. 12 74 IPR001005 -
Lele18g0580 282 Pfam Myb-like DNA-binding domain 17 74 IPR001005 -
Lele18g0580 282 MobiDBLite consensus disorder prediction 217 240 - -
Lele18g0580 282 MobiDBLite consensus disorder prediction 138 152 - -
Lele18g0580 282 SMART sant 16 76 IPR001005 -
Lele18g0580 282 MobiDBLite consensus disorder prediction 168 198 - -
Lele18g0580 282 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0580 Lele-ChrLele18 3442698 3443856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0580 4 259 MYB Transcription Factor Family AT5G62470 39.306 1.61e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele18g0580 Myb_DNA-binding 2.4e-15 CL0123