Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0573 ATGTCTGGCCAAAAAAGTTGCAGAGCTTCAAACTTCAAGGAGAATGAGATTAATGATATTGGGTCCAATTTACAAGCACTTCTGCCTCAACTGAATCGAAGGACTGACTCAAGGGTATCAGTGCCAAAGATCTTGAAAGAAACTTGCAGTCACATCAAGAAGCTACAGAAAGAGGTGGAAGAGCTTAGTGAAAGGCTAATAGGGCTGATGGATTCTGCTGACATTAGGGATATAGACGAAGAGAGTCTTAGAAGATTATTGCCACATTGA 270 0.4111 MSGQKSCRASNFKENEINDIGSNLQALLPQLNRRTDSRVSVPKILKETCSHIKKLQKEVEELSERLIGLMDSADIRDIDEESLRRLLPH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0573 89 PANTHER DNA BINDING PROTEIN 4 88 IPR044172 -
Lele18g0573 89 Gene3D - 13 86 IPR036638 GO:0046983
Lele18g0573 89 Coils Coil 45 72 - -
Lele18g0573 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 67 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0573 Lele-ChrLele18 3396855 3397352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0573 1 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 45.570 3.00e-14 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele18g0573 None None None