Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0570 ATGTATGATGAGCCTCGAGGGTGTAAGAGTAATTTGGATTTGCTTCGGAATAAAGAAGCTGAAACACTTGGTTCCGAAGCAACTATTGCGCAAAGACTTCCGACACGACGTACCTTTTTTAATCCCAACCAATTTATGAAGTGTGACCTGGGTTCACAGAGGAGCAACAAACCGAGCAAGCACAAAATTGATGGAGCTTTAGATCGCTTTCTTGAGTTTCTTCCGTTTTTCGGCTCCACTTTTCCTTTATTGTCTTGGTTTTCAAGCTCTCTCTGTTTCATGGTATGCTACTTTCACTGTCATTCTCTCGGTTGTCTATTTCAGAATGGTAGATTTGAGGTGAAGAGGTTAATCATTTACCGGTCCATTGGAAGTCCTGAACTATGTTGTCCTGATCTCACAATGGGCAAGTCACCAGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCCAAAGGAAGAGAGAAATTTGTTATCCAGAAAGAAGCATTGGTTGCTTCCAAGGCATCAGAAACTGGTGTGGCCCTAGAACCACCCCCCTATACTGTTGCCAGAAATGAGGAAGAGTTGGAATTGGAGAATAAAGAAGTAGAAAATCTTTCTCCTGTGAATCAGGAAGTGGATTTGGTGCCACATGTTGATCAAGACGCACCACCTGATCCGGAGAAAATCAGGCAGGAGGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCTCTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTTCAGGCACTTCTTCGTGGAGGGAGGATTAGACAGTCTCATGCTGGTTATGAAATCCGTGAGAAGTACAATGTTTTGAAGCTTCAGGATGGAAAGCGTGCTAATCCAGCTGATATAGCCACAAAATTTGCAAAGTTATCAACAAATACTTACACCCGCAAGCTTCTTGCATCATCTACTACGATAGTGGCCTTGGGCCTGCAATACATTCCTGGTGATCCAAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCTGCATCTCATTTTTGGGTACCGATTCCCCAACCCAAGAAAATTCCAGACTCTAGGTCTCGGAGAAAGCAAGTTGGAGAAGTTCAAATGAGCAAGTCAAGACGCACTAACCGGAAGCTTCCAACTGTAAATTCGGACTCAGTCCCAGTGCAAGCAAATCCTGAATCTGAGAAACCAAAAAGAAACCTGAGGAAAATGTCAAACCAAGCTGCAGATCCAGGGCAAGAAAATCCACAAAGTGATCTCGAAAAGGTTAAGCGGAGCCTGAGAAAGATCCATAACCCTGTTGTTGAGAATGCTGCTCCACCAGAAGTTGAATCTGAGACCCCAAAACAGCAATTGGAAAAGGCAAATATTACCTTAGAACATATTGTTTCAGAACAAGAGGCTATTAGCTCTAATGAAATATCTAACAAAGAACCAGCATTGGCTGAGCCTGTGCCCAATGTACTTGATGTGGAAATTACTCCTAGACCTTCGGTTAGCAAGGAGGTGTCTGAAATGTCAGGTGGCTATCAAGTGGAATTGGATCCAAAGCCCTTGGTGGAGAATACATGTAAAGATGAAAATACTTCCGGTGATGATGCTTTAAATGAGCCAAAAGATCTACCAGAGAGTGGTTGTAATGATGAAAATTCTCCCCTAACAAATGGGGATCTGAATCATAAGGAAGATCCAATAGGCAACGAAAACCAGAGACCCGCCCGGCGAGTCTCAGTTCCAGGGAAACAGGAACGTGCAGAGAATGGTATAGAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCACAAGGGTCACCAAGGCTTGGACAAGATGGTGTTGAGAGAAACAACTATGCACGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTTGTTCCCATTCACCAAGGACACACAGGCCAGTTCAGCCAGGCAGCAAAGGGGGGCACAAAACTGTCTCATCTAGAGATGGAAATGGAAGGGTAATTCAAGCCGAGTGGAGGAGGTGA 2139 0.4399 MYDEPRGCKSNLDLLRNKEAETLGSEATIAQRLPTRRTFFNPNQFMKCDLGSQRSNKPSKHKIDGALDRFLEFLPFFGSTFPLLSWFSSSLCFMVCYFHCHSLGCLFQNGRFEVKRLIIYRSIGSPELCCPDLTMGKSPGKWIKTVLFGKKSSKSNISKGREKFVIQKEALVASKASETGVALEPPPYTVARNEEELELENKEVENLSPVNQEVDLVPHVDQDAPPDPEKIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALLRGGRIRQSHAGYEIREKYNVLKLQDGKRANPADIATKFAKLSTNTYTRKLLASSTTIVALGLQYIPGDPNSVLSWLERWSASHFWVPIPQPKKIPDSRSRRKQVGEVQMSKSRRTNRKLPTVNSDSVPVQANPESEKPKRNLRKMSNQAADPGQENPQSDLEKVKRSLRKIHNPVVENAAPPEVESETPKQQLEKANITLEHIVSEQEAISSNEISNKEPALAEPVPNVLDVEITPRPSVSKEVSEMSGGYQVELDPKPLVENTCKDENTSGDDALNEPKDLPESGCNDENSPLTNGDLNHKEDPIGNENQRPARRVSVPGKQERAENGIESSPTLPSYMAATESAKAKLRAQGSPRLGQDGVERNNYARRHSLPSSTNSKICSHSPRTHRPVQPGSKGGHKTVSSRDGNGRVIQAEWRR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0570 712 Pfam Protein of unknown function (DUF4005) 615 691 IPR025064 -
Lele18g0570 712 MobiDBLite consensus disorder prediction 386 405 - -
Lele18g0570 712 Pfam IQ calmodulin-binding motif 235 254 IPR000048 GO:0005515
Lele18g0570 712 Pfam IQ calmodulin-binding motif 257 274 IPR000048 GO:0005515
Lele18g0570 712 MobiDBLite consensus disorder prediction 382 455 - -
Lele18g0570 712 ProSiteProfiles IQ motif profile. 233 261 IPR000048 GO:0005515
Lele18g0570 712 MobiDBLite consensus disorder prediction 552 577 - -
Lele18g0570 712 MobiDBLite consensus disorder prediction 532 712 - -
Lele18g0570 712 Gene3D - 231 281 - -
Lele18g0570 712 PANTHER IQ-DOMAIN 5-RELATED 135 672 - -
Lele18g0570 712 SMART iq_5 232 254 IPR000048 GO:0005515
Lele18g0570 712 SMART iq_5 255 276 IPR000048 GO:0005515
Lele18g0570 712 MobiDBLite consensus disorder prediction 662 683 - -
Lele18g0570 712 MobiDBLite consensus disorder prediction 406 423 - -
Lele18g0570 712 ProSiteProfiles IQ motif profile. 257 284 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0570 Lele-ChrLele18 3362830 3368401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0570 135 712 IQD Protein Family AT1G74690 43.729 6.57e-122 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0570 18 3362830 3368401 Lele19g0598 19 3429270 3437092 hybridization
Lele18g0570 18 3362830 3368401 Lele20g0850 20 15133968 15139457 hybridization