Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0558 ATGGGAGTGACGACGACAGAGTGGATAGGTGTTATTGTAGGATGTCTTCCATTGTTAGGGTTTGTGTTGTGGTGGATTGAAATTTTGATATGGGGAAGGAGAAGGTCTGTTCAGGACTCATCTGTTTGGAAAACCCTCAATCATAGCATACGCACCATTGATGACCAAATTTGTTTTCCAATCATGAGAGGACAAGTTCATCTTAGAATGGCCCGCCGTCCAGCTTCTGGGCCCCGCTTCTCTGGTGGCAGTTCACGGAAAGGAGCATGCGAGGCTCCGTTCCTTCGTCACCAACGCCATCAACCTCCCCGACGCTCTCCGCCGCATCGCTCTTCTCGTCCAGCCTCGCGTGGTGGCCGCACTCCAGTGACATTAGAGAACATGAGGAAATATTTTGGGAGCTTCGAGCCTTGCGATCTGCTTGACACCATGGATAAGCTGATCGAGGGGAAGAAGCTTGAGGAGATCTTTGGGATGGAGTTGCAGAGGAGGAGGAAGACAAGGGTGGTGGGAACTGTTGATGATCTAATGGACGGCTTGATGAAGATTAAAGACGACGAAGGGAATAGCTTGAGTGACGTAGAAATTTTGGACAACATCGAAGAGAACATGACTTCAAAAAGGGCCAAAACTGGGGATTTCATCACAACTGAAGAGATCTCCAAGTTGAAATACACAAACATGGCCTGTCGTAGAAGAATTATCAAAGAAGTTGAATACAAAGGTTACAAACTTCCCAAAGGTTGGAAAGTAATTCTATGGCTTCGATACTTACACGCAGACCCCAAAAATTTTGAGGATCCTATGTGCTTAAACCCTGACAGATGGAACGAGCCTGCGAAGCCAGGAACGTACCAAGTATTTGGTGGTGGAATGAGAATTCGTGTTGGGAACATGCTTGCTAGACTTCAACTTGGAATTATGCTTCATCATCTGTCTACAGGATACAACCCACATGATCTGGACAACAGAGACACCGATGATGGAGGAAAAGGAAAGAGGAAGATGAAGGAGGTATCGTCATCCCTTGTGTGGGCGTCGTGGCTCAGCGGCTTCAATATCGACATCGTGGGAGAACAGGAGGAAGATGAAGGAGGTTTTGAACTCATTTCGAAGACTCAAATGAAAATGTTTAACGTTGCCTGGGTTTTCCTGGTGATTTCCGCCATCGTTTTCTTTCCTTCCTCTTTTGCTCTCACTCAAGATGGTCTGGCGTTGTTGGAAATCAAAAGCGCTTTGAATGATACTAAGAATGTTCTCAGCAACTGGCAAGATTTTGATGAGTCTGCATGTGCATGGACCGGTATCAGTTGTTATCCCGGCGAACAACGAGTTCGCTCAATAAATCTGCCCTACATGCAACTCGGAGGTATTATCTCTCCCAGCATTGGCAAAATCAGTGGACTGCAGAGATTGGCACTGCATCAGAACAGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACAGAGCTAAGAGCATTGTACCTGAGGGATAATTATTTACAAGGTGGCGTACCATCAAATATTGGAAACCTTTCCTATTTAACCATATTGGATTTATCCAGCAATTCCTTGAAGGGTGCTATACCTTCATCTATTGGCCGCCTCACACATTTGCGACTTTTGAACTTGTCAACCAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTCGGAAATAACTCGTTTACAGGAAACTTAGATCTTTGTGGGCGGCAAGTTGATAAACCTTGTCGAACCTCGCTTGGCTTCCCTGTGGTGTTACCACATGCTGCAAGTGATGAAGCTACAGTTCCTCCTCCCAAAAGATCTTCACATTACATGAAGGTTCTGCTAATAGGTGCCATGTCTGCGTTGGGCCTTGCACTTGTGATAATGGTTTCATTCCTCTGGACTTGTATGCTTTCAAACCAGGAAAGAGCTGCTCGGAGATACAAAAACATCAAGAAGCATTTTGATCCGGAATCAAGCACAAAACTTATGACCTTCCATGGTGATCTGCCATACCCATCATCCACCCTCGTTGAGAAGCTTGACTCTCTTGATGAAAAGGATGAAGTAGGATCAGGAGGGTTGGGTACTGTTTACAGAATGATCATGAATGATTCTGCAACATTTGCTGTTAAGAGGATGGACAGAAATCATGTTGGATCCGAGCAGGTTTTTGAGAGGAACTTGGAGATTTTGGGCAGCGTCTCACACATAAATCTAGTGAATCTGCGTGGTTACTGCGTGCTTCCTTCTTCAAAGTTCCTTATCTATGATTATTTTGCCGCTGGCAGCTTAGATTATCTATTGCATGAAAATGGTGGAGCACAATTCTTGAATTGGAGTGCTCGTTTGAAAATAGCCCTTGGTTCTGCAAGGGGTTTGGCATATTTGCACCATGATTGCACTCCAAAAATTGTGCACAGCAACATAAAATCCAGCAATATCCTGCTTGATGAAAACTTGGAGCCTCATGTCTCTGATTTTGGCCTCTCAAAGCTCTTAGCAGACAAGGACACCAATGTTACCACTGTAGTTGCAGGCACTTTTGGCTTCATGGCACCAGAGTATCTTGAAAGTGGTAGAGCTACAATGAAGTCAGATGTGTATAGTTTTGGAGTATTATTGCTAGAACTTGTGACTGGAAAGAGACCAACAGATACTTACTTTGCAAAGCAGGGACTAAACGTTGTTGGATGGATGAACATGTTGCTGAGAGAGAAGAGGATGGAACAATTGATTGACAGAAGATGCTGTAGAGATGCAGATTCAGCGAGTGTTGAAGCAATGGTTGATGTTGCAGCAAGATGCACAGATGGTAATCCAGACAAGCGTCCATCCATGAAGCAGGTGTTTCAGTTGCTAGAACAAGAACTTGCTATGTCCCCATCTTCAAGTGACTTCTATGAATCCCAATCTGATCATATGCTTCTATCATTTCCTTCAATTTCCTCCCAAAACATGGCCGACGCAGAGTCTACCTTAAATCACAGCCTCGTCAACCATGGCAAGCTAACCGGGAAAGTAGCCATTGTCACTGGCGGTGCAAGTGGTATTGGCGAAGCGACGGCGTGCCTCTTTGCCGATCATGGTGCGCGTATGGTGGTGATCGCCGACATCCAAGACGAGCTCGGCAACCAGGTGGCGGCGTCCATCGGCACCGACAGGTGCAGCTACGTCCACTGTGACGTGAGGGGCGAGGATCAAGTGAAACACCTCGTGGAATCAACGGTCAATACCTATGGACAGCTCGACGTCATGTTCAGCAACGCTGGTATTCTCAGCCCCTCCGATCAGACCATCCTTGACCTCAACTTCTCAGAAATGGACAGTTTATTTGCGGTCAACGTCCGGGGGATGGCGGCGTGTGTGAAGCACGCAGCTCGGTTGATGGTGGAGAAGCGCGTGAGGGGGAGCATAGTGTGCACGGCTAGCGTGGCGGGCAGCCATGGTGGTTCGCAGTCGACAGACTACTGCATGTCGAAGCACGCGGTGGTGGGGCTAATGCGAGCGGCGAGTGTGCAGCTGGCGGCGCGTGGGATAAGGGTGAACAGCGTGTCACCCAATGGATTGGTGACCCCATTGACGGGCAAAACCCGCGGGATGAGAGAGGAGAACTTGAGAGAGGTTTATAGGAAATACGCGCGGTTGGAGGGCGTGGACCTCACACCCAAACACGTGGCGGATGCGGTGCTGTTTCTAGCTTCTAACGATTCGGAATTTATCACGGGCCACGATCTCACGGTAGACGGAAGCTTTGCCCATCGGTGA 3777 0.4726 MGVTTTEWIGVIVGCLPLLGFVLWWIEILIWGRRRSVQDSSVWKTLNHSIRTIDDQICFPIMRGQVHLRMARRPASGPRFSGGSSRKGACEAPFLRHQRHQPPRRSPPHRSSRPASRGGRTPVTLENMRKYFGSFEPCDLLDTMDKLIEGKKLEEIFGMELQRRRKTRVVGTVDDLMDGLMKIKDDEGNSLSDVEILDNIEENMTSKRAKTGDFITTEEISKLKYTNMACRRRIIKEVEYKGYKLPKGWKVILWLRYLHADPKNFEDPMCLNPDRWNEPAKPGTYQVFGGGMRIRVGNMLARLQLGIMLHHLSTGYNPHDLDNRDTDDGGKGKRKMKEVSSSLVWASWLSGFNIDIVGEQEEDEGGFELISKTQMKMFNVAWVFLVISAIVFFPSSFALTQDGLALLEIKSALNDTKNVLSNWQDFDESACAWTGISCYPGEQRVRSINLPYMQLGGIISPSIGKISGLQRLALHQNSLHGTIPPEITNCTELRALYLRDNYLQGGVPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGNNSFTGNLDLCGRQVDKPCRTSLGFPVVLPHAASDEATVPPPKRSSHYMKVLLIGAMSALGLALVIMVSFLWTCMLSNQERAARRYKNIKKHFDPESSTKLMTFHGDLPYPSSTLVEKLDSLDEKDEVGSGGLGTVYRMIMNDSATFAVKRMDRNHVGSEQVFERNLEILGSVSHINLVNLRGYCVLPSSKFLIYDYFAAGSLDYLLHENGGAQFLNWSARLKIALGSARGLAYLHHDCTPKIVHSNIKSSNILLDENLEPHVSDFGLSKLLADKDTNVTTVVAGTFGFMAPEYLESGRATMKSDVYSFGVLLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQLIDRRCCRDADSASVEAMVDVAARCTDGNPDKRPSMKQVFQLLEQELAMSPSSSDFYESQSDHMLLSFPSISSQNMADAESTLNHSLVNHGKLTGKVAIVTGGASGIGEATACLFADHGARMVVIADIQDELGNQVAASIGTDRCSYVHCDVRGEDQVKHLVESTVNTYGQLDVMFSNAGILSPSDQTILDLNFSEMDSLFAVNVRGMAACVKHAARLMVEKRVRGSIVCTASVAGSHGGSQSTDYCMSKHAVVGLMRAASVQLAARGIRVNSVSPNGLVTPLTGKTRGMREENLREVYRKYARLEGVDLTPKHVADAVLFLASNDSEFITGHDLTVDGSFAHR 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0558 1258 SUPERFAMILY L domain-like 399 575 - -
Lele18g0558 1258 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 1147 1175 IPR020904 GO:0016491
Lele18g0558 1258 Pfam Leucine rich repeat N-terminal domain 401 438 IPR013210 -
Lele18g0558 1258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1009 1253 IPR036291 -
Lele18g0558 1258 SUPERFAMILY Cytochrome P450 151 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele18g0558 1258 Pfam Protein kinase domain 689 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0558 1258 Gene3D - 996 1256 - -
Lele18g0558 1258 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 763 969 - -
Lele18g0558 1258 Pfam Enoyl-(Acyl carrier protein) reductase 1016 1253 - -
Lele18g0558 1258 Gene3D Transferase(Phosphotransferase) domain 1 763 969 - -
Lele18g0558 1258 Gene3D Ribonuclease Inhibitor 399 586 IPR032675 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1011 1028 IPR002347 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1219 1239 IPR002347 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1084 1095 IPR002347 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1181 1198 IPR002347 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1160 1179 IPR002347 -
Lele18g0558 1258 PRINTS Glucose/ribitol dehydrogenase family signature 1134 1150 IPR002347 -
Lele18g0558 1258 Gene3D Cytochrome P450 200 332 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele18g0558 1258 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0558 1258 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 443 958 - -
Lele18g0558 1258 Pfam Leucine rich repeat 492 549 IPR001611 GO:0005515
Lele18g0558 1258 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 399 561 - -
Lele18g0558 1258 FunFam Short-chain dehydrogenase reductase 996 1258 - -
Lele18g0558 1258 Gene3D Phosphorylase Kinase; domain 1 648 762 - -
Lele18g0558 1258 MobiDBLite consensus disorder prediction 96 123 - -
Lele18g0558 1258 CDD STKc_IRAK 693 959 - -
Lele18g0558 1258 Pfam Cytochrome P450 228 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele18g0558 1258 SUPERFAMILY Protein kinase-like (PK-like) 667 958 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0558 Lele-ChrLele18 3292165 3302649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0558 381 965 Receptor kinase-like Gene Family AT2G35620 44.103 2.10e-166 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele18g0558 Pkinase 7e-42 CL0016