Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0549 ATGGAGAATTCCGGCTTCAACTTCGACTTCAACTCCAAATGGGTGTCAACGGTGGCCAGCATATGGATTCAGTGCACCAGTGGCTCCTTCTACACGTTTTCAATCTACTCCGATGCCCTCAAGTCCACTCAGCACTATGATCAGTCTACCCTAGACACCATATCCGTCTTCATGGACATCGGTGTCAACGCCGGCGTCCTCTCCGGTCTTCTATATGATTTCGCTGCCCACCGAACCAGGGCTGGCCCTTGTCTGGTTCACCTTCTTGGTGCAGCCCAATGCTTTTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGCGTCATCCCTCCACCGCCCGTGCCGCTTATGTGTTTGTTCATGCTCGTAGCTGCTCATGCTCAGAGCTTTTTCAATACTTCCAATGTTGTCACCGGCGTGCGTAATTTCCCACATTATGGTGGAACCATTGTGGGCATTATGAAGGGATTTCTTGGTCTCAGTGGAGCTATACTAATCCAAGTGTATCAGACAATATTTAAGAACAAGCCTGCTGCATACCTCCTGATGCTAGCCTTCTTACCCCCCGTAAATACCTTGCTGCTTATGTGGTTTGTCAGAATCCACAATACCCGTGAGGCAGATGAGAGGAAATATCTAAATGTTTTGTCTATGATAGCTCTAGTTGTAGCTGCTTATCTTATGGCCATCATAATTGTAGAGAAAATTTTTAGTCTGCAATTATTGGTCCACATCTTTGTGTTCATTTTGCTGATAGCTTTGTTAGCCTTGCCTCTATGTGTTGCACTAAAAGCACAGAAAAGAAACTTGAAAAATGCTTCAGAGAGTTTTCCTTCCGAGGCTTCCCCTTTAATTGTTGAACCAACTCACTTAGAGAGGGAGAAGAGGAATGTAAGACAAGATTCTGCTGAGGTTCATAAGCCTAGTAATACAGATCAAGATATGGGAGAAAACCAGAATCTGGCACAAGCTTTGCAATCTGTGAACTTTTGGTTTCTGTTTGTTTCAATGGCATGTGGTATGGGATCAGGACTTGCAACAGTCAATAACATTGGTCAGATTGGAGGATCCCTTGGTTATACAAGCCATGAGACAGGATTGTCACGGCCTTTATTCATGTTCATCGCTCTAATGATCATGAGCATTGGCCATGTGGTGATAGCTTCTGGATTGCCGTCTGCTCTATATGCTGGTTCCGTATTGAGGCAGAGTATTGGTGACTTGTCCATGGCTTTCTTTGATTATATGAAAGTCCTTGGTGCGCTTGATGTCTCATCATGTCTAGAAATCTTCACTCTCTTTCTGTCTTTCTTCATTTCACATATTCTCAAGTCCTCTTCATCTTACCTTGGCTTCTCTGGCCCCAAACCTCCCAAGGGTCTATGCTTAGAGAAAATTGTGGATGGAGCTTACCTTAGTATGTTTCCACATCCTGATGGCTCCAACCGTGCTTTCTTGACGAGTTTGGAAGGCAAGGTATGGCTAGCTTCAATTCCTGATGAAGGGTCTAATGAGATTTTGGCATTCGATGAATGCAGACCCTTCGTAGGTATTAGTGATCACATTCTGTTTGATTCTGGGCACGGTTTGATGGGAATTGCATTTCATCCAAACTTCACACAATGGCCGCTTCTTTCTCTCATATTCTTGTGA 1653 0.4483 MENSGFNFDFNSKWVSTVASIWIQCTSGSFYTFSIYSDALKSTQHYDQSTLDTISVFMDIGVNAGVLSGLLYDFAAHRTRAGPCLVHLLGAAQCFLGYFLMWAAVAGVIPPPPVPLMCLFMLVAAHAQSFFNTSNVVTGVRNFPHYGGTIVGIMKGFLGLSGAILIQVYQTIFKNKPAAYLLMLAFLPPVNTLLLMWFVRIHNTREADERKYLNVLSMIALVVAAYLMAIIIVEKIFSLQLLVHIFVFILLIALLALPLCVALKAQKRNLKNASESFPSEASPLIVEPTHLEREKRNVRQDSAEVHKPSNTDQDMGENQNLAQALQSVNFWFLFVSMACGMGSGLATVNNIGQIGGSLGYTSHETGLSRPLFMFIALMIMSIGHVVIASGLPSALYAGSVLRQSIGDLSMAFFDYMKVLGALDVSSCLEIFTLFLSFFISHILKSSSSYLGFSGPKPPKGLCLEKIVDGAYLSMFPHPDGSNRAFLTSLEGKVWLASIPDEGSNEILAFDECRPFVGISDHILFDSGHGLMGIAFHPNFTQWPLLSLIFL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0549 550 Gene3D - 456 549 IPR011042 -
Lele18g0549 550 SUPERFAMILY MFS general substrate transporter 13 205 IPR036259 -
Lele18g0549 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 362 - -
Lele18g0549 550 SUPERFAMILY MFS general substrate transporter 217 397 IPR036259 -
Lele18g0549 550 Pfam Nodulin-like 13 262 IPR010658 -
Lele18g0549 550 MobiDBLite consensus disorder prediction 294 316 - -
Lele18g0549 550 MobiDBLite consensus disorder prediction 294 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0549 Lele-ChrLele18 3234985 3238626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0549 10 401 Nodulin-like Gene Family AT1G74780 48.724 5.36e-126 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0549 18 3234985 3238626 Lele20g0877 20 15271152 15274930 hybridization