Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0547 ATGTCTAGAAATCTTCATACTCTCTTTCTGTCTTTCTTCGTTTCACATATTCTCAAGTCCTCTTCATCTTACCTTGGCTTCTCTGGCCCCAAACCTCCCAAGGGTCTATGCTTAGAGAAAATTGTGGATGGAGCTTACCTTAGTATGTTTCCACATCCTGATGGCTCCAACCGTGCTTTCTTGACAAGTTTGGAAGGCAAGGTATGGCTAGCTTCAATTCCTGATGAAGGGTCTAATGAGATTTTGGCATTCGATGAATGCAGACCCTTCGTAGTTGCAGAGTTTACAGTCAATGGCACAGCATCAAAGCCTTCCCTGGTATGCATTGCAAGTATACCTCTTTCATATTTTGTCTCTGAAGACTGTTACAATGGTTCTGATCGTGATGATCCTTACAACTTTTCCCAGAACAAGAGGTCGTTACTGGGGAAAATTTTGAGGATTTATGTAGACAATTTACCTAGTACCAGAAAAATAAAGGATCAAGGTTTATGGGGAAACTATAGTATTCCTAGAGATAATCCATATCTCAACGACAAGGAGCTTGAACCAGAGATATTTGCTTTGGGTTTTAGGAATCCTTGGAGTCTTAGTTTTGACTCCAAGAGGCCATCCTACTTTCTCTGTGGAGAGTGGAGACTCAGGACAAGTTCAGTGATAGATCAATATGAAGAGATCGATACGGTGAAAAAGGGCGGGAACTACGGGTGGCGAGTCTACGAGGGACCTTTACTTTTCCGGCCATCAGAATCTCCTGGAGGAAACACCTCTACCAGTTCCATACACCCCATCTTTCCTATATTGGGATATAATCATTCAGAGATTGATAATAGCATACCTGTTTCTGCATCCATTGTAGGTGGCTATTTTTATCGCTCCATAACTGATCCTTGCATGTATGGAAGGATCTATATTGTAGGTGTAGAGAGTCCTGAGAGAAGTGGAAACTTCACCAGTTCCAAAATTCCTTGTGCATGTGCTTCTGACTCTTCAATGCAATGCTCTTTTGTGAAGGGAAGTTCAAATCCTGTATTGGGGTATGTCTTCTCATTAGCAGAAGATAACACGAAGGACATTTACCATCTCACAAGCACTGGGGTTTATAGAGTGACGCGACCAAGACGTTGTAGATATTTGTTTACCAAGGAAAAGGTTTTTGTTTCAGAACATAACAACCCTCACTCTTCTTCTTCTTCCTCATTTCCGGAAGTTGTTGATTTCCTTCTGTTGTTATTAGTCTTTCTTATCCGACATTCTATGTTTTGA 1266 0.4131 MSRNLHTLFLSFFVSHILKSSSSYLGFSGPKPPKGLCLEKIVDGAYLSMFPHPDGSNRAFLTSLEGKVWLASIPDEGSNEILAFDECRPFVVAEFTVNGTASKPSLVCIASIPLSYFVSEDCYNGSDRDDPYNFSQNKRSLLGKILRIYVDNLPSTRKIKDQGLWGNYSIPRDNPYLNDKELEPEIFALGFRNPWSLSFDSKRPSYFLCGEWRLRTSSVIDQYEEIDTVKKGGNYGWRVYEGPLLFRPSESPGGNTSTSSIHPIFPILGYNHSEIDNSIPVSASIVGGYFYRSITDPCMYGRIYIVGVESPERSGNFTSSKIPCACASDSSMQCSFVKGSSNPVLGYVFSLAEDNTKDIYHLTSTGVYRVTRPRRCRYLFTKEKVFVSEHNNPHSSSSSSFPEVVDFLLLLLVFLIRHSMF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0547 421 Pfam Glucose / Sorbosone dehydrogenase 163 241 IPR012938 -
Lele18g0547 421 Gene3D - 118 372 IPR011042 -
Lele18g0547 421 PANTHER HEDGEHOG-INTERACTING PROTEIN 28 93 - -
Lele18g0547 421 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 162 249 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0547 Lele-ChrLele18 3225656 3227626 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0547 18 3225656 3227626 Lele19g0573 19 3289918 3294619 hybridization
Lele18g0547 18 3225656 3227626 Lele20g0878 20 15274994 15276732 hybridization