Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0546 ATGTCCGAAGGATCTCCCTCTCCTCCTCCGATTTCCGGCGAACCCGGTAACCGATCCTCGCCGGAACCAAATTCCGAAAACCACGTCCCTGATTCCCAAAACGGGGTTGCCACTTCTAAGGAAGAAACGACAACCGCTCCTACCACTACGAGGAGCAACCGGCCATCTCGCGCGTGCACCATTCGAACTGCTTCTCGTCTATATTCATCGGTGCAGCCGGCGATCCAACGGAAGTCCAAAGAGGCAAAGAAGGAGGAGAAGCAGGAGGACTCGCCGCAGCAGCAATGCAGAAAGATCGTGACGCCGTTAGTAGAACCGCCTCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTCAATTTCTTGCATGTATTTAGGCCTCTCTTAAACATCTCAGTAGAATTCTCGGCTGAAGAATTTGAGACAGCTCTCCTTATGCCCAATGACACATTGAGTGATATACATATGCCGTTGTTAAAGGTAATTCCTCCCATTACAAGAATGGCTCTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGGGATATTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCATATAAATCACTTGATCCCGGGGTCCGTGTTGTCATCTTAAAAGCTTTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAAGTTACATTGACAACTCACTTAGACATGGTGTTCAACTATCAACATTTCGAAAAGAGCGTATTGGGGGTGATTCTCATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATATCGCGAAATAAGGAACACTGAAGTAGTTCAAGTGAAGAAGGGGAAGCCAAAAGGTTCAAAGGTTGTTTCTAATACATCATATCGGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGACGTTTCTGAGAAGCTTTGCTCAAGTAGAAATAGAACTGAGGCTTCTCTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTGCACAAGAGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGGGTTGATGGCCTTGCTACTGGGCGTTCACTTCGTGATAGGAAGCCTGTTACTTACGCATTTGATGATTATGATCGGTCCATCAATGAGGCGATTAAAGTAACCAAACAAAAACAGCCATCTCCAGAACCTATGTCTAGGAGAGATATAGTAGGAAAACACGAAACCTTGAGTAGTGGTAGACGGAGTGGTCCTTCACATGCCTCAGAACATCTGAATTTTAGTATGCCATCTCCAAAGTCGCCTGACTTTGATGATACTGAGGAAGAGCACAGATCTGAATTATTGGACCGAAGCAATCGGCGAAGACAGAGGCCCATGCGGTACTCAGAGAAAGAATTCGTTGAAGCATTATCAGATAACGAGGCAGACTATGACAGTGATGATGATATTGTTGGAGAAGCTGTTTATGATGAAGAGTATCTCAGGAAACGTAAACAGAGAAGGAACCATTCCAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGATGAAGACAATGTTGAAGAAGATGATGATGATGATGATGAAGATTCCTTGAGCATCAGTGAAGACAGCGACAAGCCTCAGAAATATAAGCAATTGCCAGGTCGTACGAGGAGAGAAACTAAACTCAAGTCTGTAGATGAGATTAACATTGGTTTACGACGCAGCAAGAGGGCTACCAGAAACCGTATCAATTACCGTCAATATGAGATGTCAGACTCAGAGCCAGAGTCTATGAAACCTGAGAAGTCTAATGCTTCAGACAATCTCTCAGGTCCCAGCGAAAATGGGGATTATATGATGGAAGATGATGAAGATTCAGATGACAATGATGGAGAAGATCAGGAAACAAAAGAAGATAATGAGCCTCATGCTTATGTTGCCGAGGAAGAGAAAGAAGAAGAACAAAAGCAACCTCCTGAAAAATCAGATAGTCCTAATCAGGAGGAAGGTGAGGGCACAACAAAAAGACGTTTCCTTGATTTGAATGAGCTTGCCCCTACCTCTGGCTTTGACGATGGTCTAAACACAATAGTGAAAGATGAGGATAATGATGTTCAAGCTTCCCCTTCTTAA 2199 0.4402 MSEGSPSPPPISGEPGNRSSPEPNSENHVPDSQNGVATSKEETTTAPTTTRSNRPSRACTIRTASRLYSSVQPAIQRKSKEAKKEEKQEDSPQQQCRKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKVIPPITRMALTRDTWITVLCRKLRDWWFWVADGDIPIVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREIRNTEVVQVKKGKPKGSKVVSNTSYRWEAVATNFDEFQDVSEKLCSSRNRTEASLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYAFDDYDRSINEAIKVTKQKQPSPEPMSRRDIVGKHETLSSGRRSGPSHASEHLNFSMPSPKSPDFDDTEEEHRSELLDRSNRRRQRPMRYSEKEFVEALSDNEADYDSDDDIVGEAVYDEEYLRKRKQRRNHSSSSEGDDEYQWDEDNVEEDDDDDDEDSLSISEDSDKPQKYKQLPGRTRRETKLKSVDEINIGLRRSKRATRNRINYRQYEMSDSEPESMKPEKSNASDNLSGPSENGDYMMEDDEDSDDNDGEDQETKEDNEPHAYVAEEEKEEEQKQPPEKSDSPNQEEGEGTTKRRFLDLNELAPTSGFDDGLNTIVKDEDNDVQASPS 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0546 732 MobiDBLite consensus disorder prediction 434 487 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 17 76 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 519 732 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 658 700 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 538 561 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 562 596 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 609 623 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 1 108 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 461 487 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 77 93 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 639 657 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 519 537 - -
Lele18g0546 732 MobiDBLite consensus disorder prediction 438 455 - -
Lele18g0546 732 PANTHER REMODELING AND SPACING FACTOR 1 50 717 IPR028938 GO:0006355|GO:0031213
Lele18g0546 732 Pfam DDT domain 125 170 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0546 Lele-ChrLele18 3215243 3220907 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele18g0546 DDT 4.9e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0546 18 3215243 3220907 Lele19g0572 19 3281942 3287618 hybridization
Lele18g0546 18 3215243 3220907 Lele20g0881 20 15287927 15292036 hybridization