Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0538 ATGTCTCACACGTGCGCTGCCGCCGATTCCGCCGTAAGCGCTGATGGTGATGGTTCCACCGGAGAGATCATGCTGTTTGGGGTTAGAGTTGTGGTCGATTCCATGAGGAAGAGCGTGAGTATGAATAATCTCTCTCAGTACGAGCATCCCCAGGACGCCACAAACAATAATAACGGCAACAAGGAAGATACTCTGGCTGCCGGCTATGCCTCCGCCGATGAAGCAGCTGCTCATAATTCTGGCAGGCATCGCGAGCGTGAGCGTAAGCGAGGAGTTCCGTGGACAGAGGAAGAGCACAAGCTGTTCTTGCTGGGATTGCAGAAAGTTGGTAAAGGTGATTGGAGAGGGATCTCGCGGAACTACGTGAAAACTCGGACGCCCACACAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGGCGAACCAACCTCAACCGCCGACGCCGTAGATCCAGCCTTTTCGATATCACCACTGACACGGTCTCTGCAATCCCAATGGAAGAAGAACAGATCCAGCATCAAGATTATGCACTGTCTCATTCAAATCCAGTGTGCCCCGCAACCCCTGAAACTACAAACATGAATGGATTCCCAATGATGCCAGTATATCCAATGGGTGTTGGTTCTGGAATGATTTCAGTCCCAATTTCGAATCCAATAGGAACGGTGAACGGTAATGGGCAACCCCAGCAGCTAGTCCGATCAATTACTGTTCTTTCACATCCTCAAGCCTCTGATGCGTCTAATATCACATCAAGTTCAAGTTCAGCTGTTGATCCACCAACCTTGTCTCTCGGGTTATCCTTGTCTTCTTCTGATCAAAGACAAACAACTTCAACAAGGCATTCATCTATACTTGCCACCATGCCATGTTTCAACAATGGAGATAACATCATAAGCGTTGCCTGA 909 0.4928 MSHTCAAADSAVSADGDGSTGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDATNNNNGNKEDTLAAGYASADEAAAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDTVSAIPMEEEQIQHQDYALSHSNPVCPATPETTNMNGFPMMPVYPMGVGSGMISVPISNPIGTVNGNGQPQQLVRSITVLSHPQASDASNITSSSSSAVDPPTLSLGLSLSSSDQRQTTSTRHSSILATMPCFNNGDNIISVA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0538 302 FunFam transcription factor MYB1R1 92 143 - -
Lele18g0538 302 SUPERFAMILY Homeodomain-like 88 142 IPR009057 -
Lele18g0538 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Lele18g0538 302 SMART sant 90 140 IPR001005 -
Lele18g0538 302 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Lele18g0538 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Lele18g0538 302 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Lele18g0538 302 Gene3D - 92 144 - -
Lele18g0538 302 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Lele18g0538 302 MobiDBLite consensus disorder prediction 73 92 - -
Lele18g0538 302 CDD SANT 93 138 IPR001005 -
Lele18g0538 302 PANTHER TRANSCRIPTION FACTOR KUA1 4 243 - -
Lele18g0538 302 MobiDBLite consensus disorder prediction 77 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0538 Lele-ChrLele18 3174445 3176096 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele18g0538 Myb_DNA-binding 1.6e-11 CL0123