LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g0520	ATGGATTTCAAACGCATGTTCTTGGAGTCGATTCCATTTGTAGCGATGGTGATGGTGGAGTGCTTGGATGTGGGAATGACCACAATAAGTAAAGCAGCCATGTCCAGAGGAATGAGCCACTTCGTCTTCGTCGTCTACTCAAATGCTCTTGCCTCTGCCATTCTCCTTCCTTCCTCTTTCATCTTCAACAGACAAAATAGGCCTCCGCTTTCTCTCTCGCTACTCTGCAAATTCTTCCTCCTCAGTCTTGTTGGGATAACTGTGATGCAGAATTGTGTTTTCGCTGGTATAAGCTACAGCTCGCCCACTCTTGGATCTGCTATGAGCAACTTGGTTCCAGCGTTCACTTTTGTGCTTGCGGTCATCTTCAGGATGGAGAAGTTAGATTTTAGAAGCTTGAAGAGCCAGATGAAGATCTTGGGCACGGTGGTGTCCATCGCAGGAGCATTTGTCGTGATCCTTTACAAGGGAGCTTCCATCGGCAAATCTCCAAGTCATCATTCAACTGAAAATCCTTCTCAATCCTTGTTGGATCAAACAAACAACTGGTTGATTGGGGGTCTCTTCCTTGCAACAGCTGGTTTATCTCTTTCAGTCTGGAGCATTTCTCAGGCAGCAATTCTGAGAGGATATCCATCTGAGTTGACCATAGTGGCCTTCTATTGCCTCTTTGGAACAATCCAATGCAGCATGCTCTCTCTGATAGCAGTCAGAGATCTCAATGCATGGATACTTAGGCCTGACATTGAGCTCATCTCCATTATCTATTCAGCGATTTTTGGGAGCGTGGTGACATTTTCTGTGCTGACATGGTGCATCCACAAGAAAGGACCTGTATTTGTGGCCATGTTCAAGCCTGTGGGGATTGCAATTGCTGCATTCATGAGTGTGGCTTTCCTCGGGGACACACTCCATGTTGGCAGTATTATTGGAGCAGTAATAATTGTTTTCGGGTTCTACACAGTAGTGTGGGCACAATCCAAAGAGGAAAATGAGAAGTCAAATAATAAAGTTCATAAGCAACCATCGTCATCACAAAGGAGACCTCTGCTAGAAAGTCATCTTCATGAAGCAAATATTTTAACATAA	1089	0.4472	MDFKRMFLESIPFVAMVMVECLDVGMTTISKAAMSRGMSHFVFVVYSNALASAILLPSSFIFNRQNRPPLSLSLLCKFFLLSLVGITVMQNCVFAGISYSSPTLGSAMSNLVPAFTFVLAVIFRMEKLDFRSLKSQMKILGTVVSIAGAFVVILYKGASIGKSPSHHSTENPSQSLLDQTNNWLIGGLFLATAGLSLSVWSISQAAILRGYPSELTIVAFYCLFGTIQCSMLSLIAVRDLNAWILRPDIELISIIYSAIFGSVVTFSVLTWCIHKKGPVFVAMFKPVGIAIAAFMSVAFLGDTLHVGSIIGAVIIVFGFYTVVWAQSKEENEKSNNKVHKQPSSSQRRPLLESHLHEANILT	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g0520	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	243	328	-	-
	Lele18g0520	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	50	156	-	-
	Lele18g0520	362	Pfam	EamA-like transporter family	185	323	IPR000620	GO:0016020
	Lele18g0520	362	Pfam	EamA-like transporter family	24	153	IPR000620	GO:0016020
	Lele18g0520	362	PANTHER	WAT1-RELATED PROTEIN	12	335	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g0520	Lele-ChrLele18	3067305	3069093	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g0520	9	357	Nodulin-like Gene Family	AT5G40240	46.045	2.83e-100	299