Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0518 ATGGGTCGAAATCGAAATCGAAATCCTATATGGGTACTCTTCATGGGGGCGTTTTCGTTTCTTCCAATGTTTTATACAGAGGATGAAGAAGTGAAGCAGGCAATGGTGAGATTCATGGAGAAACTTGATCCAACGAATACACCAAGAGATATGAACTGGGGTTGGAACTTACCTTCAGATCCTTGCATTGACGAATGTTATGGAGTTCAATGTTATTCAGGAGCAAAATTTGTGAAGAATATAGTTCTTGAGGATTCTGGTTTCACAGGAACTTTAGACGCTGCTTCTCTCTGCACACTTCAGCTTCTTCAAGGCCTTAGCTTGAAGAACAACAACTTACATGGCCTCATACCAAAAGAAATAGGAATGTGCAAAGCATTGAGACTTTTGTATTTAAGTGGCAACAATTTCTCCGGCGACCTTCCTCTTTCGCTTTCACAGTTAGGTAATCTGAAAAGGATCGATGTTTCAGATAACAACTTCTCTGGTGACCTTCCTGATATGAGTCATATTACAGGGTTAGCATCTTTTCGAGCCCAGAATAACGAATTCACGGGGGAAATTCCCAACTTTGTTTTCTCCAACCTGCAAGAGTTCAGTGTCTCCAACAACAATTTACAGGGTCCAATTCCTGAATTGATAATAAGCTTGTTTGGAGCAGACAGCTTTTCTGGTAATCCCAACTTATGTGGACCACCACTTGAAAGCCCATGTCCTCAATTTCCTCCTCCTCCTCCTCCTCCTGCTGCAACACAAAAGAAGAAAAGCAGAAAACTTTTCAGTCGTAGATTGGCCATTTATTCTGGGTACGTGATTCTTGGTATGGTTGTTCTGCTTTACTTGGCATTCAAGATTGTTAAGCGTTACAGAGCTAAAAAGGAGCCATTGAATGCTGCTGAGAAGAAGGAAGTAATAACAGAGGAAGCTAGCAAGGAGGAGAAGGCCATAGAACCTTCGAATGAAGTGAATGGGATTGATGTAACGAGATCAGAGTATTTAGTGTCATCTATTGAGACAGGGATGGTTTCATCAAATCTGGTTGTTCTTATGAGTCCAGTAGTGAGGACTCTGAAATTTGAGGATTTGTTGAGAGCTCCTGCAGAATTGGTAGGCAGAGGGAAGCATGGAAGCTTGTACAAGGTGATGCTGGGCAGTGGGGTGGTTTTAGCAGTGAAGAGAATCAAAGATTTGGGGATTTCAAAACAGGGTTTTGATAATAGGATGCACAAGTTAAACCAAGTGAAACATCCCTGTGTTCTTCCTCTTCTTGCATTTTATTGCTCCCTTCAAGAGAAGCTTTTGGTGTATGAGTTTCTGCATAACGGTAGCCTCTTCAAGATGCTCCGTGGATCTCAAAGTGGGAAAACTACATTTGACTGGGGAAGCAGACTGAATGTTGCAACCAACATAGCAGAAGCCTTAGCCTACACGCACGAGGAGCTTCGTGAAAGTGTGATAGCTCACGGCAACTTGAAATCGAGCAACATATTGTTCGACAAGAACATGAATCCACGCTTAAGCGAATATGGATTAATGGCGGTTGAAAATCAAGGCAAATATGTCTTCAGCAGCAATGGTCAGAATAACAATAATGGATTTGATCTGGTTCGGTGGGTTAACTCAGTGGTGAGAGAGGAATGGACAGTGGAAGTATTTGACAAGTGTTTGACAACAGAGGAAGCTAGTGAAAAGAGGATGATGAGTTTGTCGCAGATAGCTTTGAAATGTGAGTGA 1734 0.421 MGRNRNRNPIWVLFMGAFSFLPMFYTEDEEVKQAMVRFMEKLDPTNTPRDMNWGWNLPSDPCIDECYGVQCYSGAKFVKNIVLEDSGFTGTLDAASLCTLQLLQGLSLKNNNLHGLIPKEIGMCKALRLLYLSGNNFSGDLPLSLSQLGNLKRIDVSDNNFSGDLPDMSHITGLASFRAQNNEFTGEIPNFVFSNLQEFSVSNNNLQGPIPELIISLFGADSFSGNPNLCGPPLESPCPQFPPPPPPPAATQKKKSRKLFSRRLAIYSGYVILGMVVLLYLAFKIVKRYRAKKEPLNAAEKKEVITEEASKEEKAIEPSNEVNGIDVTRSEYLVSSIETGMVSSNLVVLMSPVVRTLKFEDLLRAPAELVGRGKHGSLYKVMLGSGVVLAVKRIKDLGISKQGFDNRMHKLNQVKHPCVLPLLAFYCSLQEKLLVYEFLHNGSLFKMLRGSQSGKTTFDWGSRLNVATNIAEALAYTHEELRESVIAHGNLKSSNILFDKNMNPRLSEYGLMAVENQGKYVFSSNGQNNNNGFDLVRWVNSVVREEWTVEVFDKCLTTEEASEKRMMSLSQIALKCE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0518 577 Gene3D Ribonuclease Inhibitor 193 240 IPR032675 -
Lele18g0518 577 SUPERFAMILY Protein kinase-like (PK-like) 367 520 IPR011009 -
Lele18g0518 577 MobiDBLite consensus disorder prediction 234 251 - -
Lele18g0518 577 SUPERFAMILY L domain-like 61 234 - -
Lele18g0518 577 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Lele18g0518 577 ProSiteProfiles Protein kinase domain profile. 364 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0518 577 Gene3D Phosphorylase Kinase; domain 1 338 438 - -
Lele18g0518 577 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Lele18g0518 577 Pfam Protein kinase domain 368 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0518 577 PANTHER OS05G0588300 PROTEIN 15 576 - -
Lele18g0518 577 MobiDBLite consensus disorder prediction 234 255 - -
Lele18g0518 577 FunFam Nuclear pore complex protein NUP107 28 190 - -
Lele18g0518 577 Gene3D Transferase(Phosphotransferase) domain 1 439 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0518 Lele-ChrLele18 3054890 3057229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0518 55 576 Receptor kinase-like Gene Family AT1G68400 32.991 1.74e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele18g0518 Pkinase 7.8e-17 CL0016