LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g0516	ATGACGAGCCAGGATGTTCGTGAAACGCTAGTATCTAGTTCTTTCTGTTCTTTGAATCAATTTTTCAAAGATCCTCATTTGTTGATCTACATAAAGTTGGTGCTCAGTCCATTCATTAGTCTGTTCGACTTCATTGGAGGAGTTAATTCAAGTTCCCCTGAATCTTCTAGAACTCCATCAGGAGTTATGAATGATTCAGGAATTATGTCTAATGATGGTGGTGATAATTCATATGATTCCTCATCAGATGACAGGAAAAGGATAATCATAGTAGCGAATTTTCTTCCTCTCAATGCCCAACAGGATGATTCTGGCAAGTGGTGCTTTAGCTATGACGAAGACTCGATTTTGCTGCAACTAAAGGATGGTATCTCTCATGATATTGATGTTTTTTATGTCATATCTCTAACTGTTGATGTTGTAAAAAGAAAACAAAATGGAGTTTCTCTTGAGTTGCTGGAGGAATTCAAGTGCTTGCCTGTATTTATTCCTCCAGACACCCGCAAAACGTATTACAACCGATTTTGCAAGCAGTATTTATGGTCCCTATTCCATTACATGATGCCAATGAATCTGGCTTATGGCAATCTCTTTGATAAGTTACTTTGGAGAGATTATGTTGCTGTTAATGTAAAATTCTCGGATAAGGTCATCGAAGCTGTTAATGATCTAGAAGAAGATTATGTATGGATTCATGATTATCATCTTATGGCCTTGCCGATGTTTCTGCGCAAGCAGTACAATCGTTGCAAACTAGGCTTTTTCCTCCACAGTCCTTTTCCTCCTTTGGAAATTTACATGGCTCAGCCTATTGGAGTACACATTTTGAAAGCTCTGCTTAATTCGGATTTAATAGGGCTTTCAAACATTTGA	873	0.378	MTSQDVRETLVSSSFCSLNQFFKDPHLLIYIKLVLSPFISLFDFIGGVNSSSPESSRTPSGVMNDSGIMSNDGGDNSYDSSSDDRKRIIIVANFLPLNAQQDDSGKWCFSYDEDSILLQLKDGISHDIDVFYVISLTVDVVKRKQNGVSLELLEEFKCLPVFIPPDTRKTYYNRFCKQYLWSLFHYMMPMNLAYGNLFDKLLWRDYVAVNVKFSDKVIEAVNDLEEDYVWIHDYHLMALPMFLRKQYNRCKLGFFLHSPFPPLEIYMAQPIGVHILKALLNSDLIGLSNI	290

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g0516	290	Pfam	Glycosyltransferase family 20	87	288	IPR001830	GO:0003824\|GO:0005992
	Lele18g0516	290	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	87	287	-	-
	Lele18g0516	290	MobiDBLite	consensus disorder prediction	50	82	-	-
	Lele18g0516	290	Gene3D	Glycogen Phosphorylase B;	75	289	-	-
	Lele18g0516	290	MobiDBLite	consensus disorder prediction	50	77	-	-
	Lele18g0516	290	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	68	288	IPR001830	GO:0003824\|GO:0005992

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g0516	Lele-ChrLele18	3050033	3051986	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g0516	53	287	Trehalose Biosynthesis Gene Families	AT1G23870	52.282	1.34e-76	248

Showing 1 to 1 of 1 entries