Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0511 ATGAATGAGATCTTCATCTCTCTGATTCTACTGTTTCTGGGTATCGCGGCTTTGGTGTTGATCCATGTGTTCGTTGTGGGGAGGGCTCTGCGCAGAAGAAATAATCAGGGTGGGAACGAAGAACAGAGCAATGGCGATTTTGATGGAATTGGGACGAAGAGAATGTCAAGTGAGGAGATGAAGGATCTGCCCTGTTTTGAGTATAAGGAAGCAGAGAAGGAAGAAGGAGGAGGAAGTAGCAGCACTGTGACTGTGGATTGTGCAGTTTGCTTAGAGAGCTTCAAGGATGGTGATATGTGCAGGTTCTTACCTAATTGCTCTCATAGCTTCCATGTCACCTGCATAGATTCATGGATTCTCAAAACACCCATTTGTCCGATTTGCAGAACCTGGGTTAACTCGCCGATGATTCCCACGGTTGTTACTGAACAGGTTCAAGCTTCACAAAATGGTGTAATTGAGATTGTATAG 471 0.4501 MNEIFISLILLFLGIAALVLIHVFVVGRALRRRNNQGGNEEQSNGDFDGIGTKRMSSEEMKDLPCFEYKEAEKEEGGGSSSTVTVDCAVCLESFKDGDMCRFLPNCSHSFHVTCIDSWILKTPICPICRTWVNSPMIPTVVTEQVQASQNGVIEIV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0511 156 MobiDBLite consensus disorder prediction 35 58 - -
Lele18g0511 156 FunFam RING-H2 finger protein ATL2K 55 135 - -
Lele18g0511 156 Pfam Ring finger domain 86 129 IPR001841 -
Lele18g0511 156 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Lele18g0511 156 SMART ring_2 87 128 IPR001841 -
Lele18g0511 156 MobiDBLite consensus disorder prediction 36 50 - -
Lele18g0511 156 SUPERFAMILY RING/U-box 59 135 - -
Lele18g0511 156 CDD RING-H2_PA-TM-RING 86 129 - -
Lele18g0511 156 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 5 136 - -
Lele18g0511 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 135 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0511 Lele-ChrLele18 3031755 3032225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0511 1 129 C3H Transcription Factor Family AT2G17450 33.333 3.68e-18 75.5