Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0504 ATGATGAAGAACTTTCACAGCTTCAAACAGATTCCAACCCCGAAAAGGTCTGGAAGGAGGCTGTCGCTTGGGGAATACAAGCGAGCTGTGTCATGGTCCAAGTACTTAGTTTCTTCAGGAGCTTCCATTAAAGGAGAAGGAGAAGAAGAATGGAGTGCCGATCTGTCTCAGTTATTCATTGGATCCAAATTTGCTTCTGGAAGACACAGTAAGCTCTACAGAGGCATTTACAAGCAAAAAGATGTCGCCATCAAGCTCATAAGCCAACCTGAGGAAGATGCCGACTTGGCTTCTGAGGTTGAAAAGCAATTCACTTCTGAAGTTGCTTTGCTCTTTCGTTTGCACCATCCAAACATCATCACTTTTTTTGCTGCCTGCAAGAAGCCACCTGTATTCTGTATAATTACTGAATATATGGCTGGAGGATCACTGAGAAGTTACCTGCATCAGCAACAACCATATTCAGTTCCACTCAATCTGGTTCTGAAATTAGCCCTAGACATTGCCAGAGGGATGCAGTATCTTCATGCTGAGGGGGTTCTTCATAGGGATCTTAAATCAGAGAACCTATTGCTTGGAGAAGATATGTGTGTAAAAGTAGCAGATTTTGGAATCTCATGTTTAGAATCACAGATTGGTAGTGCAAAAGGATTCACAGGAACTTACCGTTGGATGGCGCCTGAAATGATCAAAGAAAAACATCATACCAAAAAAGTAGATGTTTATAGCTTCGCCTTAGTGCTATGGGAGCTCTTAACTGGACTGACTCCATTTCACAACATGACACCAGAACAAGCAGCTTTTGCAGTCTCACACAAGAATGCGAGGCCGCCGTTACCAGCTGAATGTCCAAAGGCATTTAGTCATCTGATAAACAGATGCTGGTCAAGCAATCCAGAAAAAAGGCCAGATTTTGATGAGATTGTTTCTATTTTGGAGATGTATAATGAATCCCTTGAAGAAGATCCTGAGTTCTTCTCAACTTACAAACCACCTTCTTCTAATTCTCTTGTGATGAGATTCTTACCAAAATGTATTATTAGTAGCCATAGATCTTCTTGA 1062 0.4153 MMKNFHSFKQIPTPKRSGRRLSLGEYKRAVSWSKYLVSSGASIKGEGEEEWSADLSQLFIGSKFASGRHSKLYRGIYKQKDVAIKLISQPEEDADLASEVEKQFTSEVALLFRLHHPNIITFFAACKKPPVFCIITEYMAGGSLRSYLHQQQPYSVPLNLVLKLALDIARGMQYLHAEGVLHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFALVLWELLTGLTPFHNMTPEQAAFAVSHKNARPPLPAECPKAFSHLINRCWSSNPEKRPDFDEIVSILEMYNESLEEDPEFFSTYKPPSSNSLVMRFLPKCIISSHRSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0504 353 Gene3D Phosphorylase Kinase; domain 1 48 140 - -
Lele18g0504 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lele18g0504 353 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 FunFam Serine/threonine-protein kinase isoform 1 48 140 - -
Lele18g0504 353 Pfam Protein tyrosine and serine/threonine kinase 61 312 IPR001245 GO:0004672|GO:0006468
Lele18g0504 353 Gene3D Transferase(Phosphotransferase) domain 1 141 336 - -
Lele18g0504 353 SUPERFAMILY Protein kinase-like (PK-like) 46 314 IPR011009 -
Lele18g0504 353 SMART serkin_6 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0504 353 ProSiteProfiles Protein kinase domain profile. 58 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0504 353 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 314 - -
Lele18g0504 353 CDD STKc_MAP3K-like 65 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0504 Lele-ChrLele18 2991468 2993685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0504 31 346 MAP Kinase Kinase Kinase AT1G62400 60.000 7.98e-141 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele18g0504 PK_Tyr_Ser-Thr 8e-65 CL0016