Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0490 ATGGAAGAAAGATTTGTTCCCTTTGAAGGGATCAAGAATGACCTCAAAGGAAGAATTGTGTGTTACAAAGAAGATTGGACAACTGGTTTCCGAGCTGGTATCAGGATTCTTGCCCCAATCACATACATATTTTTTGCATCAGCAATTCCAGTTATTTCTTTTGGGGAGCAACTGGATAGAAATACAGATGGAACTCTGACTGCCGTGCAGACTCTTGCATCAACAGCACTCTGTGGTGTTATCCATTCAATCTTTGGAGGGCAACCTCTCCTCATTCTTGGTGTAGCTGAGCCGACAGTTCTAATGTATACCTTCATGTATAATTTTGCTAAGGATCGAAAGGATTTGGGTCACAAACTCTTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACAGCCTTGTTGCTCTTTTTGTTGGCCGTTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCATTGCTGGGGAATTATTTGGTCTGCTCATTGCAATGCTCTTTATGCAGCAGGCCATAAAGGGAGTTGTGGAGGAGTTTGGTGTACCCAAGAACCAGAGAGAAAGTACCAGTTCGATAGCACTTGAACCATCTTGGCTGTTTGGCAATGGCATGTTTGCTTTGGTTTTGTCATTTGGCCTTATTTTTACAGCACTGAAAAGTCGTAAAGCTAGATCCTGGCACTATGGGACAGGTTGGCTTAGGGGATTTATAGCCGATTATGGAGTCCCACTATTGGTGCTAGTGTGGACTGCTGTATCTTACATACCAGTCAACGAGGTCCCAAAGGGGGTCCCTAGGCGACTATTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACAGTTATCACGGAAATGTTGGATGTTCCTGCTGTGTATATTTTTGGAGCATTTATACCAGCAACTATGATTGCTGTACTATACTACTTTGATCACAGTGTTGCGTCACAACTTGCACAGCAGAAGGAGTTCAATCTAAGAAAACCTTCTTCCTATCATTATGACCTTCTTCTTTTGGGCTTTTTGACTTTGTTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGGGTCATTCCACAATCTCCAATGCATACAAAAAGCTTAGCTACTCTACAACATCAGCTTCTGAGGAGAAAGCTTATATCAACTGCAGGACAAAGTATGCGGAAAAATATGAACCTCAGCCAGTTGTACCAGAATATGCAAGCAGCGTATGATAACATGCACACTCCACTGGTCCATCAAATGCCACCTGCACTGAGGTTAAAAGAGCTGAAGGAGTCCACCATCCAACTTGCTTCTAGTCAAGGATACGTTGATGCCCCTGTTGATGAGATTGTGTTTGATGTGGAAAAGGATGTTGATGATCTTTTGCCTGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAAGCATTGATGGTTGGTGGTTGTGTTGCTGCTATGCCTGTTCTGAAGAAGATACCAACTTCAGTCCTATGGGGCTACTTTGCTTTCATGGCTATAGAGAGTCTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTGTCTGTTGACTGCTCCAAATCGAAGATACAAGGTGCTGGAGAAAATGCATGCAACTTTTATTGAGACCGTGCCCTTCAAAACAGTTGCCATGTTTACCTTGTTCCAAACGGCTTACTTGCTTGCATGCTTTGGTATAACTTGGATACCAATTGCTGGGGTCCTTTTCCCGTTGTTAATCATGCTTCTTGTCCCAGCACGGCAATATGTCCTTCCTATGTTTTTTAAAGGAGTACATCTTCAAGAGTTGGATGCTGCAGCCTACGAGGAAGCCCCTGCTGTTTCTTTCAACATGGCATTTGAAGATCCAAGTTGTCATACTCAAGCAACAACTGTCAACATTAGTGGTGGGGAAATTCTTGATGAAATTATTACAAGGAGCAGAGGGGAGATTCGTGGCATCCACAGCCCGAAAACAAGTAGTTCGACACCAACTTCATTTGGTGATATAAGACCTGCTAATAGTCCACAGCTAGTGCAAAGGATTCACAGTCCTCGAGTAACTGAATTGAGAGGGGAAAGGGGCCTAGGATCAGCCAAAAAAGAGATCATGCTAAAGCAAACTCCTAGTCCAGGGTCATCGGTTCCTAGACAAGATATTAAAGATTCATCTTGA 2169 0.4361 MEERFVPFEGIKNDLKGRIVCYKEDWTTGFRAGIRILAPITYIFFASAIPVISFGEQLDRNTDGTLTAVQTLASTALCGVIHSIFGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGVVEEFGVPKNQRESTSSIALEPSWLFGNGMFALVLSFGLIFTALKSRKARSWHYGTGWLRGFIADYGVPLLVLVWTAVSYIPVNEVPKGVPRRLFSPNPWSPGAYSNWTVITEMLDVPAVYIFGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLQHQLLRRKLISTAGQSMRKNMNLSQLYQNMQAAYDNMHTPLVHQMPPALRLKELKESTIQLASSQGYVDAPVDEIVFDVEKDVDDLLPVEVKEQRLSNLLQALMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILCLLTAPNRRYKVLEKMHATFIETVPFKTVAMFTLFQTAYLLACFGITWIPIAGVLFPLLIMLLVPARQYVLPMFFKGVHLQELDAAAYEEAPAVSFNMAFEDPSCHTQATTVNISGGEILDEIITRSRGEIRGIHSPKTSSSTPTSFGDIRPANSPQLVQRIHSPRVTELRGERGLGSAKKEIMLKQTPSPGSSVPRQDIKDSS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0490 722 MobiDBLite consensus disorder prediction 705 722 - -
Lele18g0490 722 MobiDBLite consensus disorder prediction 684 698 - -
Lele18g0490 722 MobiDBLite consensus disorder prediction 651 722 - -
Lele18g0490 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Lele18g0490 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Lele18g0490 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Lele18g0490 722 MobiDBLite consensus disorder prediction 652 680 - -
Lele18g0490 722 Gene3D Helical hairpin bin 18 60 - -
Lele18g0490 722 PANTHER ANION EXCHANGE PROTEIN 3 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0490 Lele-ChrLele18 2897134 2901344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0490 1 691 Antiporters AT3G62270 73.951 0.0 1042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0490 18 2897134 2901344 Lele21g1794 21 25604209 25605059 CCT
Lele18g0490 18 2897134 2901344 Lele23g0214 23 1431564 1432930 CCT
Lele18g0490 18 2897134 2901344 Lele19g0510 19 2920001 2924134 hybridization
Lele18g0490 18 2897134 2901344 Lele20g0945 20 15608108 15612983 hybridization