Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0479 ATGTTGGTCAGAGAATATTCCACAATGGGTAGTCTTTGGATATGCCATTTCTTTCTGCTGTTTCTAACCATGCTGAATGCTTCTTTCGTCGCCACAGTTCTTGGAGACCATGCCTCAGATTCCTACTGGCTTCTTAAAATGAAATCAGAAATGGTTGACCCATTAGGAGCTCTCAAAGATTGGTCTCCAATGGTTCCTATGAGTAGATGGTATGGAGTAACATGTTCACTTGATCAGTCTCATGTTGTAGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCATGCCAATTGAGCTCAGCCACATATCTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACCGGCTCTATTCCTTCTGAGATTGGGATACTGCAGAATCTAAGAATACTTCGACTGTTCTCAAATCATCTATCTGGCACCATTCCTGCAGAGATAGGTAATTTGAAGAAGTTGGAGGTTCTGAGAATAGGAGACAACTTGTTGACAGGTGAAATCACACCAAGTATTGGTAACTTGAAAGAGCTAACAGAGTTGGGTTTAGCTTTCTGCTACTTTAATGGAAGCATACCCACTGAGATTGGAAGCTTGAAGAACCTAGTTTCTCTTGATCTGCAGATGAACAATCTAGAGGGTCACATACCCAAAGAAATTCAAGGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCTTCTTTGGGGTCTCTTGTATCATTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGTAGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATGAACTTTCTGGTGAGTTCCCCTTGGAGTTACTCAGTTGCTCCTCACTTCAACAATTGGACCTTTCTGATAACAGCTTTGAAGGTGAACTTCCAACAACCTTGGACAAACCGCAGAACCTCACAGATCTTGCTCTCAACAACAACAGCTTCACAGGATCTCTACCTCCGGAAATTGGAAACATTAGTACCTTGGAGGGCCTGTTCTTGTTTCACAACATGTTTACAGGAGAAATCCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAACCCTATACCTTTATGATAACCAGATGTCTGGTCCAATACCAAGAGAGCTAACAAACTGCACACGCTTAAGGGAAATTGACTTCTTTGGGAACTATTTTTCTGGGCCCATTCCAGAGACCATAGGTAAGCTCAAGGGCTTGGTTCTGCTTCATCTGAGGCAGAATAACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCTTTAGCAGATAATAAATTGTCTGGTTCCATACCACCCACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTAGAAGGACCACTTCCAGAGTCACTCTTTCTTCTCAAAAACCTCAAAATCATAAATTTTTCTCATAACAGGTTCAGTGGAACTATCCTTCCTCTTACTGGTTCACATTCTCTAAATGCGTTGGACTTGACTAACAATAGCTTCTCAGGTTCCATTCCTTCAAGCTTAGCCATGTCAGGAAATCTCAGCCGTATAAGACTTGCACATAACCAACTCACAGGAAGCATTCCATCTGAATTTGGTCATCTCAATGAACTCAACTTCCTTGATTTGTCTTTTAACAATTTGACAGGAGAAGTGACACCTCAACTGTCAAACTGTAAAAAGATCCAACACTTTCTACTTAGTAATAACAGATTGAGAGGAAAAACTCCTTCTTGGTTGGGAAGTTTGCAAGAACTTGGTGAGCTTGATCTCTCATTCAATGACTTCCATGGAAGCTTACCTTCTGAGCTTGGAAACTGTTCAAAATTGCTGAAGCTTTCTCTGCATCACAACAATCTCTTTGGTGAAATACCACAAGAGATTGGAAATCTGACTTCCCTCAATGTCCTTAACTTGCAAAGCAATAATTTCTCAGGCGTCATTCCTTCATCCATTCAGCAATGCAAGAAGTTATATGAGCTCAGGCTCTCAGAAAACCTCTTCAGAGACGATATACCAGATGAGCTTGGAGGACTTACAGAACTCCAAGTGATATTGGACTTGAGCAAAAACCTCTTATCTGGGAAAATCCCATCATCGCTTGGAAACTTCATGAAGCTAGAAAGACTCAATCTTTCCTTTAATAATCTTCAGGGACAAGTTCCTCCTTCTCTTGGAAAACTAACAAGCCTGCACGTGCTGAATATCTCGTACAACCATCTCCAAGGCCAGATTCCTTCAACATTCTCAGAGTTCCCACTAAGCTCCTTCATGAACAATGACCACATGTGTGGCCCACCATTTGTATCGTGCTCAGGATCTAAAGGGCAAGATCAAGTGGTGCTGTCTAACAAAGCAGTGGCTGCGATCATAGTGGCCATTGTCTTTACTTCTACTTTGATATGCTTGGTGTTGCTGTATATTATGGTGAGAATTTGGTGTAACTGGAGGAAAGTTGCAATTTCAAGTGCAGAAGGAGGCATGGGAGAGCGAAAGAAAGAGGACGCTAGATGGATCTATAATAGTGATAAGAAAACCAGAAATGGAGAGTATTGGAATATGAACACTTTTGGGTTTAGTCCTTCACCGGATAAGCAGAGTCCAGAATCATCGGCTTGTGTTTTCAATCTTAAAATGAAAGCAGAAGCAATGGAAAATTCCTTGGTTTGA 2712 0.413 MLVREYSTMGSLWICHFFLLFLTMLNASFVATVLGDHASDSYWLLKMKSEMVDPLGALKDWSPMVPMSRWYGVTCSLDQSHVVGLNLSGSGISGSMPIELSHISSLQTLDLSSNSLTGSIPSEIGILQNLRILRLFSNHLSGTIPAEIGNLKKLEVLRIGDNLLTGEITPSIGNLKELTELGLAFCYFNGSIPTEIGSLKNLVSLDLQMNNLEGHIPKEIQGCEKLQNFAASNNLLEGDIPSLGSLVSLQILNLANNSLSGSSKLEQLFLARNELSGEFPLELLSCSSLQQLDLSDNSFEGELPTTLDKPQNLTDLALNNNSFTGSLPPEIGNISTLEGLFLFHNMFTGEIPVEFGRLQRLKTLYLYDNQMSGPIPRELTNCTRLREIDFFGNYFSGPIPETIGKLKGLVLLHLRQNNLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFSYLSELRTITLYNNSLEGPLPESLFLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGSIPSSLAMSGNLSRIRLAHNQLTGSIPSEFGHLNELNFLDLSFNNLTGEVTPQLSNCKKIQHFLLSNNRLRGKTPSWLGSLQELGELDLSFNDFHGSLPSELGNCSKLLKLSLHHNNLFGEIPQEIGNLTSLNVLNLQSNNFSGVIPSSIQQCKKLYELRLSENLFRDDIPDELGGLTELQVILDLSKNLLSGKIPSSLGNFMKLERLNLSFNNLQGQVPPSLGKLTSLHVLNISYNHLQGQIPSTFSEFPLSSFMNNDHMCGPPFVSCSGSKGQDQVVLSNKAVAAIIVAIVFTSTLICLVLLYIMVRIWCNWRKVAISSAEGGMGERKKEDARWIYNSDKKTRNGEYWNMNTFGFSPSPDKQSPESSACVFNLKMKAEAMENSLV 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0479 903 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Lele18g0479 903 Gene3D Ribonuclease Inhibitor 38 195 IPR032675 -
Lele18g0479 903 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 700 833 - -
Lele18g0479 903 PRINTS Leucine-rich repeat signature 742 755 - -
Lele18g0479 903 PRINTS Leucine-rich repeat signature 106 119 - -
Lele18g0479 903 ProSiteProfiles Leucine-rich repeat profile. 248 269 IPR001611 GO:0005515
Lele18g0479 903 SMART LRR_typ_2 103 125 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 597 621 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 127 151 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 742 765 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 645 668 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 406 430 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 358 382 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 549 573 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 454 478 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 246 271 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 199 222 IPR003591 -
Lele18g0479 903 SMART LRR_typ_2 693 718 IPR003591 -
Lele18g0479 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 400 496 - -
Lele18g0479 903 Coils Coil 895 903 - -
Lele18g0479 903 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Lele18g0479 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 497 789 - -
Lele18g0479 903 Gene3D Ribonuclease Inhibitor 196 262 IPR032675 -
Lele18g0479 903 Gene3D Ribonuclease Inhibitor 263 497 IPR032675 -
Lele18g0479 903 Gene3D Ribonuclease Inhibitor 498 794 IPR032675 -
Lele18g0479 903 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 195 - -
Lele18g0479 903 SUPERFAMILY RNI-like 268 587 - -
Lele18g0479 903 Pfam Leucine Rich Repeat 105 123 IPR001611 GO:0005515
Lele18g0479 903 Pfam Leucine Rich Repeat 720 742 IPR001611 GO:0005515
Lele18g0479 903 FunFam Uncharacterized protein 303 399 - -
Lele18g0479 903 SUPERFAMILY L domain-like 65 324 - -
Lele18g0479 903 SUPERFAMILY L domain-like 502 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0479 Lele-ChrLele18 2816016 2818970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0479 53 786 Receptor kinase-like Gene Family AT5G46330 34.581 1.36e-123 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0479 18 2816016 2818970 Lele21g1781 21 25490478 25493579 CCT
Lele18g0479 18 2816016 2818970 Lele22g1757 22 22830211 22833329 CCT
Lele18g0479 18 2816016 2818970 Lele23g0226 23 1550192 1557436 CCT
Lele18g0479 18 2816016 2818970 Lele19g0499 19 2857250 2860216 hybridization
Lele18g0479 18 2816016 2818970 Lele20g0957 20 15676852 15679818 hybridization