Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0451 ATGCGGCAGGATTCGTCCCAACAATACTTTGATGACTCTTACTCTGACTCTGAATCTGTAGAGGTTGATCCCACCGGGCTATATTACAAGGAAGTTTTAGGGGAGGGAGCTTTCCAGAAGTTAAATATCATCACATTTTATAATTCATGGGTCGATCCAGAGCATGGCAACATCAACTTCATTACTGAAATATTCACTTCAGGAACATTACTCCAATACAGGAAGAAACACAAGCGCGTTGACTTGAAAGCCTTAAAGAAATGGTCTAGGCAGATTTTGGAGGGGATTTTCTATCTTCACAGGCATGATCCACCAATTATTCATCGAGATCTCAAGTGTGACAACATCTTTGTCAATGGAAATCAGGGTAAGGTGAAAATTGGTGACTTGGGACTTGCAGCCATTCTTCAGCAAGCCAATTCAGCTCATAGTGTTATAGGTACTCCGGAGTTTATGGCGCCAGAGCTCTATCAAGAGGAATACAATGAGCTTGTTGACATTTATGCTTTTGGCATGTGCTTGCTAGAATTGGGAGTAAAGCCGGCATCTTTGGCAAAAGTGACAGATCCTGGGGTGAAGGCATTTATTGGAAAGTGTATTGCCAATAACGTAGTTGTGGCCCCATGTCTTTGGCATAAGCACTCATTGAGGATATTATTTCTGCAGAGACAAATAGGGAATTTAGAGTGGAAAGTTACAATATTTCTGAAACTGAAACTAGTAGACTTATCAGGCCATATTTGCAATATCCACTTTCCTTTTAATATTGAAGCAGACACTACAGTTGGGGTGGCCGGCGAAATGGTAGAGGAGCTTGAGCTTTCTGATCAAGATGTCACAACTATTGCTGAGATGATTGAGTTAGAAATTCAAAACCACTTTCCAGTTTAG 891 0.4108 MRQDSSQQYFDDSYSDSESVEVDPTGLYYKEVLGEGAFQKLNIITFYNSWVDPEHGNINFITEIFTSGTLLQYRKKHKRVDLKALKKWSRQILEGIFYLHRHDPPIIHRDLKCDNIFVNGNQGKVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYQEEYNELVDIYAFGMCLLELGVKPASLAKVTDPGVKAFIGKCIANNVVVAPCLWHKHSLRILFLQRQIGNLEWKVTIFLKLKLVDLSGHICNIHFPFNIEADTTVGVAGEMVEELELSDQDVTTIAEMIELEIQNHFPV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0451 296 SUPERFAMILY Protein kinase-like (PK-like) 38 204 IPR011009 -
Lele18g0451 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Lele18g0451 296 MobiDBLite consensus disorder prediction 1 20 - -
Lele18g0451 296 Pfam Protein kinase domain 38 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0451 296 MobiDBLite consensus disorder prediction 1 15 - -
Lele18g0451 296 Gene3D - 232 294 - -
Lele18g0451 296 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 249 288 IPR024678 GO:0004674|GO:0005524
Lele18g0451 296 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 39 293 - -
Lele18g0451 296 ProSiteProfiles Protein kinase domain profile. 1 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0451 296 SMART serkin_6 27 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0451 296 Gene3D Transferase(Phosphotransferase) domain 1 21 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0451 Lele-ChrLele18 2639225 2641836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0451 58 295 MAP Kinase Kinase Kinase AT3G48260 56.949 3.45e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele18g0451 Pkinase 4.6e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0451 18 2639225 2641836 Lele20g0982 20 15849828 15852421 hybridization