Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0429 ATGGCAGGTTCAGCTGCTCTGGCTTCAGAGCCCAACGCAGATGTATTTCCATGGCTGAAATCTCTGCCTCTCGCTCCAGAGTACCATCCAACTTTGGCTGAGTTCCAAGATCCAATTGCATACATTTTTAAGATCGAGAAGGAGGCCTCCAAATATGGAATCTGCAAAATCGTGCCCCCCGTGGCTCCTTCTCCGAAGAAGACTGCAATTGCGAATCTTAATCGCTCTCTGGCGGCCCGAGCTGCTTCCTCTGACCCTTCTGGTTCGAAAGCTCAGCCTACATTCACCACAAGGCAGCAGCAGATCGGCTTCTGCCCTCGGAGACCACGGCCCGTGCAGCGTCCTGTTTGGGAAAGTGGCGAATACTACACATTTCAGGAATTCGAGGCCAAGGCCAAGGCTTTTGAGAAGAGTTACGTGAAAAAATGTGCTAAGAAAGGTGCGCTTTCACCACTGGAAATAGAAACGCTTTATTGGAAGGCGACAGTGGATAAACCCTTCTCAGTTGAGTATGCAAACGACATACCTGGTTCTGCTTTTGTTCCCCTGAATGGGAGAAAATGCAGAGAGACAGGGGAGAGTGTTAGCGTTGGCGACTCTGCATGGAACATGAGAGGTGTGTCAAGGGCAAACCGCTCTTTGTTGAGGTTCATGAAGGAGGAGATTCCTGGAGTTACATCGCCAATGGTGTACGTAGCTATGTTGTTCAGCTGGTTTGCTTGGCACGTTGAGGATCATGACTTGCATAGCTTGAATTACCTACACATGGGGTCTGGCAAGACGTGGTATGGCGTGCCAAGGGATGCAGCAGTAGCATTTGAAGAAGTGGTCAGACTTGATGGTTATGGAGGAGAATTAAACCCTCTTGTGACTTTTTCTACTATGGGTCAGAAAACCACAGTGATATCACCTGAAGTATTTATTAGTGCTGGGGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACGTTTCCAAGAGCCTATCATACAGGGTTTAGTCATGGATTTAATTGTGGGGAGGCAGCTAACATTGCAACACCTGAGTGGTTGAGGGTTGCGAAAGATGCTGCTATTCGAAGGGCATCAATAAACTATCCTCCCATGGTTTCACATTTCCAATTACTTTATGACCTTGCTCTAGCTTTGTGTACTAGAATTCCTGAAAGAATCAGTGCTGAGCCACGGAGTTCTCGACTTAAAGATAAGAGGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTATACAGGATGTGCTGCAAAACAATGAGCTGCTTCATGTGCTTGGGAAAGGATCTGCTATAGTAATTCTTCCTCGGAGCTCTTCAGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAAGTAAAAGTGAACCCTCGGTATACCCTCAGTGGATGCAAGTCTGAAGGAGTAACCTCCTCAATAGGTTTTGTTTCTGATGACCTGGCTTACAACAGGAATCATGGAATCAAACAAGCCAATGGTTTCTATTCAGTAAAAGAAAAGTTTGCTTCATTGTGTGAAAGGAACAGGATTTCCTCGTTAAGTGTAAATGATAACAAATGCACCTCAAGTTCTAAGACGCTGCAAAGAGACACTGGAAAAGAAACAAATCAAAGAGATGGCTTGTCAGATCAGAGACTATTTTCATGTGTCACATGTGGAATGTTAAGCTTTGCCTGTGTTGCTATTGTAAAGCCTAGAGAACCAGCTGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGAATGCAAATGCTGTGCCTGTAGGCTATTGTCTGGCTCTGCATTGGCTTGGGCTAGATGGACAGAAAAGAATGCCCAAAATGGTGCATATGGTGTTCCTGTCCAGGTTGAACACCACAGGCAGTTTGCAGGTCAAGACTTGAAGGAGGCTTCAAATACTGGAAAACAAAAGGAAACTACAGCTCTTGGCTTATTGGCTTCCGCATATGGAAATTCTTCTGACTCTGAGGAAGACCAGGTTGACCCAAATATTGAATGTGATTATGATGAATCAAATGTTATAAACTATCCATCAGGAAGTAGACCTCAAAGGGAGATATTTAGTTTGCCCCGTGGGGGTCATCAGACTTTTGATTATTCTGTTGAGACGACAGATTATAGTATCACTTCAGGGGTTGCATTTAGAAGTACAGGGGCATTGCCTCATTCCTACTTGAATTGTTCCCATGATGTTCAAGATGACGAAACATTGATGTGCAAGGCTAGAGTTCCCATTGATAATAAAAATGTTCCATTTGTGCCACAATCTGATGAAGACTCGTCTAGAATGCATATCTTCTGTCTAGAGCATGCTGCAGAAGTCGAACAGCAACTTCATCCAATAGGAGGATCACACATATTACTCCTTTGTCATCCAGATTATCCCAAGATAGAGGCTGAAACAAAACTTGTGGCCGAAGAACTGGGGAATGATTATGCTTGGAAGAATATTGAATACAGGCATGCTACTGAAGAGGATGAGGAGAGGATTGAAGCATCCCTTGATAGTGAGGAAGCTGTTCCTGGTAATGGAGATTGGGCTGTAAAACTGGGAATCAATCTCTTTTATAGTGCCAATCTTAGCCGCTCTCCTTTGTATTGTAAGCAGATGCCTTACAATTCTGTTATATATAATGCATTTGGCTGTAGCTCTCCAGCAAACTCAGCTACAGAGCCCAAGGTTTATCAGAGGAGGGCCAACAAGCAGAAGAAGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCTCTTTTAGCAAAAGGAGACTCTGAAGATGTTGAGGATGAAAAAAGATTACATGGGTGTTCATTACCTGATGAGAAAATTGAGAGGTCAGAAAGTAGCCACAGAAACAATATTACCGATAGAAAATCTGTTAAGAAAAGGAAAATGACTGTAGAAGACAGAGGAGCTAGGGAAGCAGCTTTTGCTGAGAGAGATGTGTTTTCAGAGAATTCATTTGAAGATAAACCCAACCCAAGGCAAAGGAGGAGTTTAAGAAATAAGCAAGCCAAATATAGTGTACGAGATGGTGATGCTTTGGAAGGGGAATATTCTACACTGGCACGTCATGGAAAACATGCAAGTAACAAAACAAAATGCATTGAAAGTAATATGGTCTCAGATGATTCGCTGGATGATAATTCTCATATGCAGCACAGGAGAAATGTTGTCAATGAAGCTAAATCTTTTGATGATGATGATGTGGTTTCAGATGATGAAATGGAATATGATTCTGATTGGCAGCAGAGGGGTGAATCTAGCAGCAATCAAGTCGAAGATGCAGAGAGAGATGCAATGTCAGAGAATTCATTGGATGGTTGTTCTCTTCAGCTGCATGGGAAGACTTGTAAACTCAAGCAAGCCAAATTCATAGCCGAAGAAGATGTAACTTCTGATAGTCCTATGGAGGATCATTTTCAGAAGAGGCGATTCAGTATTTCCAAGAGCAGACAAACCAAATGCTTTTCTGGGGAAGATTTATTAACATCTGATGACCAACAGGAGCATCACATTCAGAAGCAAAAACAAAGGATTCCCAAAAGCAGGCAAGCGAGATACCTTGCTGGAAAGGATACTATATCTAATGAGCGACTTGAAAATACTTTTCTTAAGTATCAAAGAAGGACTTCTAAAAGAAGGCAAACAAAATACCTAATTAAGGAAGATGTAATGTCTGATGACCATTTAGAGCATCAAGTTCAGAAGAAGCAAAAAAGTGCTCCCAGGAGCAGGCAAAAGAAATGCATTAATAGAGGAGTTTTGGATGTTTCCATTGAAAATGATCGTCTGCTGCAAAACACACCTAAAAGGAAGCAAGTTAAATGCATGGATGAAGATGACAATAATTCGGATGATCAAGTGGAGGGTGATTCTCACCAGCAGCACAGGAGGCTTCTTCAAAGTAATCAACTCAAATCAGAGACACTGAGGCAAATTAAACATGCTAAACCTCGCAGTATGAAAAGTCAGACATCCCAGTCTGTTAAACAGAGTGCTCGGCTGCTTGTTAAAGCGAAGGCTTCTCAGCAAAAGAAGCAGGTTCCACGTGTGCGAAATAATCAATCCAACAGCTACAGAGAGTTTAGTTTACATATTGAAGAAGAGGAAGAAGGCGGACCTAGCACACGCCTTAGGAAGAGAGCCCCAAAAGTTGATGAGTCTGAGGCAAGACCAAAAGAAAAGCAAACTAAAAGGAAAAAGGTGAAGAATGCCATGCCTGCGAAGGTTTCAACTGGCCGTGCTAAATTAAAGGATAAGGAGACAGATGCATATTATCAATGTGACATTGAGGGGTGCACCGTGAGTTTTGGGTCCAAACATGAGCTTGTGCTGCATAAGAGAAACATCTGTCCAGTAAAGGATTGTGGAAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACCGTCGGGTCCACATGGATGACCGGCCCCTGAAGTGTCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCACGCACTGAACATATTCGGGTTCACACCGGAGCTCGTCCATATGCTTGTGCTGAGCCTGGCTGTGGGCAAACATTTAGGTTTGTGTCTGACTTCAGTCGCCATAAGCGAAAGACTGGCCATTCTACAAAGAAGAGTCGCCAATAA 4689 0.4321 MAGSAALASEPNADVFPWLKSLPLAPEYHPTLAEFQDPIAYIFKIEKEASKYGICKIVPPVAPSPKKTAIANLNRSLAARAASSDPSGSKAQPTFTTRQQQIGFCPRRPRPVQRPVWESGEYYTFQEFEAKAKAFEKSYVKKCAKKGALSPLEIETLYWKATVDKPFSVEYANDIPGSAFVPLNGRKCRETGESVSVGDSAWNMRGVSRANRSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVVRLDGYGGELNPLVTFSTMGQKTTVISPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCTRIPERISAEPRSSRLKDKRKGEGETVIKELFIQDVLQNNELLHVLGKGSAIVILPRSSSDISVCSKLRVGSQQVKVNPRYTLSGCKSEGVTSSIGFVSDDLAYNRNHGIKQANGFYSVKEKFASLCERNRISSLSVNDNKCTSSSKTLQRDTGKETNQRDGLSDQRLFSCVTCGMLSFACVAIVKPREPAARYLMSADCSFFNDWVECKCCACRLLSGSALAWARWTEKNAQNGAYGVPVQVEHHRQFAGQDLKEASNTGKQKETTALGLLASAYGNSSDSEEDQVDPNIECDYDESNVINYPSGSRPQREIFSLPRGGHQTFDYSVETTDYSITSGVAFRSTGALPHSYLNCSHDVQDDETLMCKARVPIDNKNVPFVPQSDEDSSRMHIFCLEHAAEVEQQLHPIGGSHILLLCHPDYPKIEAETKLVAEELGNDYAWKNIEYRHATEEDEERIEASLDSEEAVPGNGDWAVKLGINLFYSANLSRSPLYCKQMPYNSVIYNAFGCSSPANSATEPKVYQRRANKQKKVVAGKWCGKVWMSNQVHPLLAKGDSEDVEDEKRLHGCSLPDEKIERSESSHRNNITDRKSVKKRKMTVEDRGAREAAFAERDVFSENSFEDKPNPRQRRSLRNKQAKYSVRDGDALEGEYSTLARHGKHASNKTKCIESNMVSDDSLDDNSHMQHRRNVVNEAKSFDDDDVVSDDEMEYDSDWQQRGESSSNQVEDAERDAMSENSLDGCSLQLHGKTCKLKQAKFIAEEDVTSDSPMEDHFQKRRFSISKSRQTKCFSGEDLLTSDDQQEHHIQKQKQRIPKSRQARYLAGKDTISNERLENTFLKYQRRTSKRRQTKYLIKEDVMSDDHLEHQVQKKQKSAPRSRQKKCINRGVLDVSIENDRLLQNTPKRKQVKCMDEDDNNSDDQVEGDSHQQHRRLLQSNQLKSETLRQIKHAKPRSMKSQTSQSVKQSARLLVKAKASQQKKQVPRVRNNQSNSYREFSLHIEEEEEGGPSTRLRKRAPKVDESEARPKEKQTKRKKVKNAMPAKVSTGRAKLKDKETDAYYQCDIEGCTVSFGSKHELVLHKRNICPVKDCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYACAEPGCGQTFRFVSDFSRHKRKTGHSTKKSRQ 1562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1066 1085 - -
Lele18g0429 1562 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Lele18g0429 1562 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1495 - -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1063 1121 - -
Lele18g0429 1562 SMART JmjN_1 24 65 IPR003349 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1288 1316 - -
Lele18g0429 1562 SUPERFAMILY beta-beta-alpha zinc fingers 1517 1551 IPR036236 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 80 100 - -
Lele18g0429 1562 Pfam jmjN domain 26 59 IPR003349 -
Lele18g0429 1562 ProSiteProfiles Zinc finger C2H2 type domain profile. 1529 1560 IPR013087 -
Lele18g0429 1562 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Lele18g0429 1562 Gene3D Classic Zinc Finger 1467 1553 - -
Lele18g0429 1562 ProSitePatterns Zinc finger C2H2 type domain signature. 1471 1493 IPR013087 -
Lele18g0429 1562 SMART cupin_9 196 365 IPR003347 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 524 548 - -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1382 1415 - -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1184 1212 - -
Lele18g0429 1562 FunFam Probable lysine-specific demethylase ELF6 1526 1555 - -
Lele18g0429 1562 ProSiteProfiles Zinc finger C2H2 type domain profile. 1469 1498 IPR013087 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1288 1435 - -
Lele18g0429 1562 Gene3D Cupin 18 369 - -
Lele18g0429 1562 ProSiteProfiles Zinc finger C2H2 type domain profile. 1499 1528 IPR013087 -
Lele18g0429 1562 SUPERFAMILY beta-beta-alpha zinc fingers 1485 1527 IPR036236 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1339 1353 - -
Lele18g0429 1562 ProSitePatterns Zinc finger C2H2 type domain signature. 1531 1555 IPR013087 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 524 539 - -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1004 1028 - -
Lele18g0429 1562 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Lele18g0429 1562 ProSitePatterns Zinc finger C2H2 type domain signature. 1501 1523 IPR013087 -
Lele18g0429 1562 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 957 992 - -
Lele18g0429 1562 SMART c2h2final6 1499 1523 IPR013087 -
Lele18g0429 1562 SMART c2h2final6 1469 1493 IPR013087 -
Lele18g0429 1562 SMART c2h2final6 1529 1555 IPR013087 -
Lele18g0429 1562 SMART c2h2final6 1446 1468 IPR013087 -
Lele18g0429 1562 MobiDBLite consensus disorder prediction 1366 1381 - -
Lele18g0429 1562 FunFam Probable lysine-specific demethylase ELF6 1496 1525 - -
Lele18g0429 1562 SUPERFAMILY Clavaminate synthase-like 212 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0429 Lele-ChrLele18 2510234 2517714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0429 1331 1560 C2H2 Transcription Factor Family AT3G48430 53.750 4.05e-69 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele18g0429 JmjC 2e-34 CL0029