Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0423 ATGAAGAGGGCCACAACAATTTCTTCAATTTTCATCATCTTAATAACGATTTCCGTTGAGTTCGTCCATGTTTCTTCATCGTCGCCTCCCTTACATGAAAACCAGGTTTTTGAGGAATCTGCTGGTGGAAGACATAATAAACATGAACAAGAGCATGCTCAAGAAGTACATTGCTCAAGAGAAAGAAGTAGGGCAGCTTCAAAAATAATTGAGGAGTATTTGGTGCCATTCATGGAACGAGAAAACTATCAGCTCCCAGAAAAGTGCAGACTTCATCCCGACAATAATATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAGGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAGTCTTCTAAATGTAAGTCATGGCAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGATTCATACCAAGACCTCTAAAACCAAGTGTAATCCGGCAGCTGCTGGGAGAAATCGTCACCTATGTGAGAGCCTCGCAGATAGTTGTTTTCCCTTAAATGGGGGTCCCTCAGCAAGCCGCCTTCATGAATTGTTTTTGCACCAATTTTGTGACGCCCACAGCTGCTCAGGGAAACAGAAACCCTTTGTTAGAGGTGGCAGGAAGCAAAAGAGTATTTTCTATTTGGCTGCTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATTTGGTACAAAGAGATATGAGGAGTCGAACCCAAGAGCTTCGGCGCATTACAAAAGTGGGGCGAAAAACAAAACCATCATGA 840 0.4179 MKRATTISSIFIILITISVEFVHVSSSSPPLHENQVFEESAGGRHNKHEQEHAQEVHCSRERSRAASKIIEEYLVPFMERENYQLPEKCRLHPDNNIFRDQEEHKIHIDINEWRCGYCRKSFRAEKFLDQHFDNRHYSLLNVSHGKCLADLCGALHCDAVIHTKTSKTKCNPAAAGRNRHLCESLADSCFPLNGGPSASRLHELFLHQFCDAHSCSGKQKPFVRGGRKQKSIFYLAAGALTLVLLPVFYLFVYLVQRDMRSRTQELRRITKVGRKTKPS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0423 279 MobiDBLite consensus disorder prediction 39 58 - -
Lele18g0423 279 PANTHER ZINC FINGER PROTEIN-RELATED 7 278 - -
Lele18g0423 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0423 Lele-ChrLele18 2478564 2481521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0423 34 279 C2H2 Transcription Factor Family AT5G63280 64.113 6.60e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele18g0423 None None None