Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0422 ATGGCGGCTGCAGCAGTAGCCGAGCCTAGGAAAGCCCCTCGACCGGGTAAGGGCGGGTTCGAAGCTCATGGTCTTTCTGAAGAGGAAGCCCGGGTTCGAGCCATTGCAGAGATCGTCAACTCTATGGTGGACCTCTCGCGGAAAGGCCAAAACGTCGACTTGAATGCGCTCAAATCCGCAGCATGTCGCAAGTATGGACTTTCACGTGCACCCAAGCTAGTGGAGATGATAGCTGCCCTACCGGAGACGGAAAAGGAGGCGCTGCTGCCGAAGCTTCGAGCCAAACCTGTCCGAACTGCTTCTGGAATAGCCGTCGTGGCTGTCATGTCCAAGCCACACCGTTGCCCTCACATAGCGACTACTGGTAATATTTGCGTATACTGCCCCGGAGGGCCTGACTCGGATTTTGAGTACAGTACTCAGTCTTACACTGGTTACGAACCAACTAGTATGCGAGCAATTCGAGCTAGGTATAACCCATATGTCCAAGCTAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCACAGTGTGGATAAGGTCGAGTTCATTTTAATGGGTGGTACTTTCATGTCCCTTCCGGCAGACTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCCGGACACACTTCTGCAAATGTTGAAGAGGCAGTTGCCTACTCTGAGCATGGTGCAACAAAATGTATTGGCATGACAATAGAAACCATGTTTCTACCACCTCCATTGAAGCTTATCAAGAATCATTTTAGTCCAATGTTGTTTGAATTCAATGTGGTTATACTGTCTGAACACGTCAATTTGTCGCTTATTAACTCGTGCATTTCTACATTTATCAGGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGGCAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTACAAAGCACATATGAGGATGTCGCTCGAGACACAAACAGAGGGCATACAGTAGCTGCTGTTGCAGATTGTTTTTGCTTGGCAAAAGATGCTGGTTTTAAGCGGGATATTCCCATGCCTCTGGTTACTTCCGGGGTGGAGAAAGGTAATCTAAGGGAGCTAGCTTTGGCTCGGATGGAAGACCTTGGCTTGAAATGTCGTGATGTTCGAACCCGAGAAGCTGGAATCCAGGACATTCACCACAAAATAAAGCCTGAAGAGGTGGAGCTTGTGCGTTGTGATTATACGGCAAATGAAGGTTGGGAAACATTTCTGTCATATGAAGATACTCGACAGGATATTCTTGTTGGTTTGCTGCGTCTGCGAAAATGTGGTCGGAATACTACTTGTCCTGAACTTATGGGCAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCCGTTCCAGTCCATGGCCGGGATGCTGACAAGCTGCAACACCAGGGTTATGGGACACTACTAATGGAGGAGGCAGAACTAGAGCTGTTACACTCAACCAGAATTCCTACAATTCCTCCCCTGGCAGACAGCAAATAG 1500 0.4767 MAAAAVAEPRKAPRPGKGGFEAHGLSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPETEKEALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETMFLPPPLKLIKNHFSPMLFEFNVVILSEHVNLSLINSCISTFIRRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRCDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAELELLHSTRIPTIPPLADSK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0422 499 MobiDBLite consensus disorder prediction 1 24 - -
Lele18g0422 499 SFLD Radical SAM 115 341 IPR007197 GO:0003824|GO:0051536
Lele18g0422 499 SUPERFAMILY Radical SAM enzymes 135 340 - -
Lele18g0422 499 Pfam Acetyltransferase (GNAT) family 373 484 IPR000182 GO:0016747
Lele18g0422 499 SMART MiaB 105 400 IPR006638 GO:0003824|GO:0051536
Lele18g0422 499 Pfam Radical SAM superfamily 123 341 IPR007197 GO:0003824|GO:0051536
Lele18g0422 499 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 280 340 IPR039661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0422 Lele-ChrLele18 2472566 2478392 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0422 18 2472566 2478392 Lele19g0441 19 2514150 2518440 hybridization
Lele18g0422 18 2472566 2478392 Lele20g1010 20 16019019 16024043 hybridization