Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0416 ATGCATCCTCCTCTTTATAGAGCCGCCGTCAAGGATGAGATTGTTGATGGTGAAAATTCAGTATTTGGCCTCAGTCTTCGACTCGCAGCAATGGGTTGCTATACCTATCCTCGTATTCCTCCCAGTTCTGCTTCCACTAATTGGATCCTTCCTCGTTCCGATGATGATGAAACCAAGAGGGACCTAAAAGTGATTAAGAGAACCATAAGCATGTCCGATATGCTTGGAAATTTCACCAGTAATCATTCGAGCAGTGGAAATAATGGCGATACACATGGCAGCAGTATGAATAGCTTGCCAAGGCTTCATTTCAGAGATCACGTATGGACTTATACTCAGAGACACCTTGCAGCTGAAGCTGTTGAAGAAGCAGCAAAAGAGATGATCGATGAAGATGAAGCTGAGAAAGATGGATGTGCTGACGGAATGAGACTTGTTCAACTTCTAATTGCTTGCGCAGAAGCTGTGGCTTGTCGTGACAAATCACATGCTTCTAATTTACTAACTGAACTTAGAGCCAACGCTTTGGTTTTCGGTTCTTCTTTTCAAAGAGTCGCTTCTTGTTTCGTCCAGGGCCTAGCTGATCGTCTTGCCTTGACAGAACCTATTGGGGCTGTGGGATCTGTAACGCCTATAATGAATATTATGGATAAAGCTTCTGCAAAAATGGAAGAAGCTTATAGATTGATGTATGAGATTTGCCCACATATTCAGTTTGGTCACTTTGTAGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTTTTCTTCATGTGGTTGACTTGGGGATGAGCCTTGGTCTCCCCCATGGACACCAATGGCGAGCACTGATCCAGGATCTTGCTAACCGTGCCGGAGAACCTGTTTCCTGGCTTCGGATCACCGGCGTTGGCCTTTGTATTGAGAGACTAAAGAACGTAGGTGAAGAACTCGAGATTTATGCGAAGAACTTGGGGATCAATCTGGAATTCTCAGCAGTGCAAAAAAGCTTGGAAAATTTGAGTCCTGATGATATAGAAGTGCGTGAGGGTGAACTTCTTGTTGTGAACAGCATTCTTCAGTTGCATTGTGTGGTGAAAGAAAGTCGTGGAGCTTTGAACTCAGTGCTTCAGATGATCCATAAGCTTTCACCAAAAGTTTTTGTTATGGTTGAGCAAGATTCAAGCCACAACGGACCCTTCTTTCTTGGGAGATTCATGGAAGCACTGCATTATTACTCTGCGATTTTTGACTCACTTGATGCTGTGTTGGCCAAGTATGACACAAAGAGGGCGAAAATAGAACAGTTTTACTTCGCGGAGGAGATAAAGAACATAGTGAGCTGTGAGGGAGCAGCGAGGGTGGAGAGGCATGAGAGACTGGAGCAGTGGCGGAGGAGGATGGGCCGGGCCGGGTTTCAGGCGGCGCCGATCAAGACTGTGGCTCAGGCCAAGCAGTGGCTTCAGAAGAAAGAGGTCAGTGATGGATATACCGTTGTGGAAGAGAAAGGATGCTTAGTGATTGGATGGAAATCAAAGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTAA 1554 0.455 MHPPLYRAAVKDEIVDGENSVFGLSLRLAAMGCYTYPRIPPSSASTNWILPRSDDDETKRDLKVIKRTISMSDMLGNFTSNHSSSGNNGDTHGSSMNSLPRLHFRDHVWTYTQRHLAAEAVEEAAKEMIDEDEAEKDGCADGMRLVQLLIACAEAVACRDKSHASNLLTELRANALVFGSSFQRVASCFVQGLADRLALTEPIGAVGSVTPIMNIMDKASAKMEEAYRLMYEICPHIQFGHFVANSTISEAFEGQSFLHVVDLGMSLGLPHGHQWRALIQDLANRAGEPVSWLRITGVGLCIERLKNVGEELEIYAKNLGINLEFSAVQKSLENLSPDDIEVREGELLVVNSILQLHCVVKESRGALNSVLQMIHKLSPKVFVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLAKYDTKRAKIEQFYFAEEIKNIVSCEGAARVERHERLEQWRRRMGRAGFQAAPIKTVAQAKQWLQKKEVSDGYTVVEEKGCLVIGWKSKPIVAASCWKC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0416 517 Pfam GRAS domain family 145 516 IPR005202 -
Lele18g0416 517 ProSiteProfiles GRAS family profile. 136 516 IPR005202 -
Lele18g0416 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 511 IPR005202 -
Lele18g0416 517 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0416 Lele-ChrLele18 2446203 2447756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0416 137 516 GRAS Transcription Factor Family AT1G14920 38.303 5.54e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele18g0416 GRAS 5e-113 CL0063