Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0413 ATGGAGTGCAACAAGGACGAGGCTCTAAGGGCTAAGCAAATTGCAGAAAGTAGAATGCAAATTGGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAGGGCCCAAAAACTGTTTCCTGAAGTTGAGAACATTGTTCATATCCTTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACTTTCTGGATCTGAAATGGATTGGTATGGAATTCTTCAGACTGAACAACTGGCAGATGAGGCAACCATAAAAAAACAGTTCAGGAAGCTCGCCCTGCTACTTCATCCTGATAAAAATAAGTTTTCAGGTGCAGAGGCTGCATTCAAGTTGATTGGAGAGGCAAATAGGTTGTTAAGCGACAAAGAAAAGCGGAAATTATACGACGTGAAGTATAGAGCCTTCACGAGAACTGCGTCATCTAGGCCCCCATATTATAATTCAAATGGGAGTGTATTTGCCCCGAAACATGATGTAAAGGCAAGAAATCATCAGAATTATCCACAGCCCACAAGTTGGAATTCCTATCAGCAGGCTGCTCAACAAACTTTCTGGACAACTTGTAGTCATTGTAAAACTAGGTATGAATACTACAGAACTGTTTTAAATGCAACCTTACGCTGTCACCAGTGTTCTAGACCCTTTGTAGCTCGTGAGATGGGATTTCAGCATGGTCCACCTGAATATAAGTGGACATCAGACCAGAAAGAATACTCAAATTTTGAATTCATGGCAAAATGCACTCATGGAGTTGATGGGCACTGTAAAGGTGGAAAGGGTGAGGATGGCAATGTGGCTGCAGGAATGGCAAAGGTGGACGTTAGAACGTCCAAACCTGCTTCATCCAAAGCCAGGGAGTCTTATTCCTCCACTCATATTGGGAGTAAGAGGAATAGGGAGTCAGTTCCGGACCCCAGAGAAAGTTTCAAGACTGAGAATGGTAACGGTGTTAAAGGTGCCAATGTTCAAGGAAGTGGTATTGATCCTTCTGGACCTAAAGCAGAAGCACAGTCTAGGAGATCTTCCAGGCAAAAGAAGGACGTATCTTACTCTGAAACCTCCTGTGATGATGATAATCTTGAGAGTCCTAAAAGGCACCGGCGAAATGGATCATCTAGCACCATAACAATGGGGAAAAGAGAAGAACCTGCAGGCGGTGGGTTGTCTAAACACAATCATTCAGCTAGTTCTGTAGCTGGTCTGGGTGGTGAGAGGGGAGAGAAAAGCAATAAAGCAAATGGCATGCCTGAAGAAATATTGTTACAGAAGAAAAGCAAAATTGAGCAATCTCATGTGCAAAGAGAGGAGCCAACCAAGTCAAGTGTTGATGACACAAACTCAAAAGCCGATCACTATCCTCCATTTAATTCGGCTGTCCCTTCTCTTCCAGATATCATCAATTGTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAGGGTGGATAATTGTTTTGCTAAAGATCAGTTCTGGGCCATATATGATCCAAGTGATAGCATGCCTAGATACTATGCTCGTGTGAAGAAAGTGCTGTCTCCTGGATTCAAGTTGCTGGTTATTTGGCTGGAGGCTGACCCAGATGATGAAGGTGAGATTGATTGGCAAGACGCAGAATTGCCTGTTGGTTGTGGTAAGTTCAGACTGGGTGACACTCAAGAAATTGAAGACCATGCTATGTTCTCTCATCAGATGCATAATATAAAAGGAATTGGCAGAAGACGTTATGCGATATATCCTAGTAAAGGGGAAACATGGGCAATATTTAAAGATTGGGATATAAACTGGAGTTCTAACCCAGAAAAGCATTGTAAGTACGAATATGAATTTGTGGAAATCCTGTCTGATTTTACTGAGAATATTGGCATTGAAGTTGTATATCTTGGCAAATTGGAAGGCTTTGTTAGCCTCTTTCAGCAAACTGAGCGTAATGGACTTAGTTTATTTTGTGTTCCACCTAATGAGCTCTATAGGTTCTCACATCGAGTTCCTTCATTCAAAATGACTGGTGATGAGAGAGATGGTGTTCCTTGTGGATCTTTTGAACTTGATCCTGCTGGTTTGCCTGTTGATCTTTTTGGAGTTGGTAATGCTGGTGATGGGGATATTGGAGATGAAATGTTAGATGCTGGGGTCAAAAGTTCAGGCTACAAATCCTCTGAACAAAAAGTGGAAAATGTGACGCGTAATGAGAGTGATCATGATGCAAAGGTAAATAGGAGTAATGATGTTAAAAGAGCTTCCCCAATACTGAGAAGATCGCCAAGGGGGTCTAACAGAAAAGATATGAATAATTGCCAAGTTAATGGAAGTCAGTACGTGACAAGAGAGAATGGTAGCAAAGACATGGGCTGCGTGGACTTCAGTCAACCTGATGGATCTGATGAGCCTAGTAATGGGGGGAAGATGCATAAGACAGACGATGTTCAAAAGGCTTCCTCAGTACCCAGAAGATCGCCCAGGGGATTAAAAGGTAGAAGTATGGAAAATGGTCGAGTAAATGAAAGTCAACATATGACAAGAGAGGATGGTAGCAAATATGTAGGTTGCAAGGACTTCAGTCAACTTGAGGGAATTGCTTCTGAAGATCAGGCTGGCGAGAGGGTTAAAACACCAAAGAAACACGAGAAAAATGGTTGTGGAAGAGAAGGTTCCGACGTGCAAAGATCACCTAGAGATTTAAGCAAGAAAAAAGCCCAAGTAGATGCAAATCAATGCATGACTGGCAAGGCAAGTGGTGAACATTCAAATGCCGACAAAAAGTTGAAGGATAGCAGATTTTCTGAGTCTTTCGGAGGTGTTTGCGGACCTTTCGCTGAAGATTGCAGGGTTCCAAAAGCATCACGCTTTATGGTAAAATCTGAAGAGATTTTTGAGCGTGGTCAGATATGGGCATTATATGGTGATAAGGATCGGACGCCTGACACTTATGCACAAATTAAGAAGATTGATTTTGCCCCTGATATCAGATTGCATGTGGCCTTCCTTGAACCCTGTTCACTGCCCAAAGGCATAACTGGCATGGTAGCTTGTGGCGCCTTTAAGGTTAAAAATGCTAAAACCCGTGTTGTTTCCATTTCTAATTTCTCTCATCAGTTAAGAGTTGAACCCAGGAAAGATAATAGGTATGAAATTTATCCAAGGAAAGGTGAGATATGGGCGTTATACAAGAACCAGCACCGGGGATCAACTTGTTCAAATCAGGTGAGAGGGGGTTGTCACATAGTGGAAGTATTGGAAGATGATGATGAGAATTCAAAAGTTGTGGTTCTTGATCGTCATAACGACTCTAGGCCAATTTACAAGACTCCTAGAATTCAGAGATCTAAAAAAGTTATCATTGATATACCACGGGTGGATGCATATAGATTTTCTCACCAGATTCCTGCTTTTAAGCACACTGAAGATGGCGAAACTCATCTCAAAGGATGTTGGGAGCTTGATCCTTCATCAATTCCTGGTTTTGTAATAAATTTAGACTGA 3477 0.4211 MECNKDEALRAKQIAESRMQIGDFVGALKFATRAQKLFPEVENIVHILTVCEVHCAAQKKLSGSEMDWYGILQTEQLADEATIKKQFRKLALLLHPDKNKFSGAEAAFKLIGEANRLLSDKEKRKLYDVKYRAFTRTASSRPPYYNSNGSVFAPKHDVKARNHQNYPQPTSWNSYQQAAQQTFWTTCSHCKTRYEYYRTVLNATLRCHQCSRPFVAREMGFQHGPPEYKWTSDQKEYSNFEFMAKCTHGVDGHCKGGKGEDGNVAAGMAKVDVRTSKPASSKARESYSSTHIGSKRNRESVPDPRESFKTENGNGVKGANVQGSGIDPSGPKAEAQSRRSSRQKKDVSYSETSCDDDNLESPKRHRRNGSSSTITMGKREEPAGGGLSKHNHSASSVAGLGGERGEKSNKANGMPEEILLQKKSKIEQSHVQREEPTKSSVDDTNSKADHYPPFNSAVPSLPDIINCPDPDFSDFEKDRVDNCFAKDQFWAIYDPSDSMPRYYARVKKVLSPGFKLLVIWLEADPDDEGEIDWQDAELPVGCGKFRLGDTQEIEDHAMFSHQMHNIKGIGRRRYAIYPSKGETWAIFKDWDINWSSNPEKHCKYEYEFVEILSDFTENIGIEVVYLGKLEGFVSLFQQTERNGLSLFCVPPNELYRFSHRVPSFKMTGDERDGVPCGSFELDPAGLPVDLFGVGNAGDGDIGDEMLDAGVKSSGYKSSEQKVENVTRNESDHDAKVNRSNDVKRASPILRRSPRGSNRKDMNNCQVNGSQYVTRENGSKDMGCVDFSQPDGSDEPSNGGKMHKTDDVQKASSVPRRSPRGLKGRSMENGRVNESQHMTREDGSKYVGCKDFSQLEGIASEDQAGERVKTPKKHEKNGCGREGSDVQRSPRDLSKKKAQVDANQCMTGKASGEHSNADKKLKDSRFSESFGGVCGPFAEDCRVPKASRFMVKSEEIFERGQIWALYGDKDRTPDTYAQIKKIDFAPDIRLHVAFLEPCSLPKGITGMVACGAFKVKNAKTRVVSISNFSHQLRVEPRKDNRYEIYPRKGEIWALYKNQHRGSTCSNQVRGGCHIVEVLEDDDENSKVVVLDRHNDSRPIYKTPRIQRSKKVIIDIPRVDAYRFSHQIPAFKHTEDGETHLKGCWELDPSSIPGFVINLD 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0413 1158 MobiDBLite consensus disorder prediction 722 757 - -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 861 897 - -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 420 445 - -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 337 367 - -
Lele18g0413 1158 CDD DnaJ 67 120 IPR001623 -
Lele18g0413 1158 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 796 812 - -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 704 919 - -
Lele18g0413 1158 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1151 - -
Lele18g0413 1158 Pfam Domain of unknown function (DUF3444) 464 670 IPR024593 -
Lele18g0413 1158 Pfam Domain of unknown function (DUF3444) 940 1133 IPR024593 -
Lele18g0413 1158 Pfam DnaJ domain 67 128 IPR001623 -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 289 306 - -
Lele18g0413 1158 SMART dnaj_3 66 123 IPR001623 -
Lele18g0413 1158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele18g0413 1158 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele18g0413 1158 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele18g0413 1158 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 758 776 - -
Lele18g0413 1158 Gene3D DnaJ domain 52 144 IPR036869 -
Lele18g0413 1158 MobiDBLite consensus disorder prediction 271 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0413 Lele-ChrLele18 2417084 2420560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0413 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.432 6.63e-24 103