Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0411 ATGGCGAACCAGGTCGATCCAAGCTCTGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCTGACGTCCCTCTCCCTCCACCCTCTCAACCTCTCTCCATCATCGACTACGCTCTCTCTCTCATTCCTCCGACCGTTTCCTCTACCACTGTCCTCATCGACTCCGCCACCGGCAGCCGCATCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCACTTACTCCCTCGCTTCTCTCACCCCTCTCTCCAAGGGCCAGGTCGCCTTCATTCTCTCCCCTGCTTCTCTCCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCATCTCACCCGCTAACCCTATTGGCTCTGATTCGGAGGTCGCTCACCAGGTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCAACTGTTCACAAGATCCCTAAGCTTCGATACGGTACTGTAATAATCGACTCGCCTCAGTTCCTTTCCATGATCGATGGAACTTTCGGAAGTGGTAATGCTGATAACAGGTGCGTCAGAAGAGTTCAGATGAGCCAATCGGAGCCGGCGGCGATTCTCTTCTCATCTGGAACAACTGGAAGAGTGAAAGGTGTGTTATTGACTCACAGGAATTTGATTGCCCTCATTGGAGGATTTTACCACCTGAGGCACCTGATGGATTCGCAAGAGAATGAACCAGATCCGGTGTCCCTATTGACGCTGCCACTTTTCCACGTCTTTGGGTTTTTCATGATGATTAGGGCGATATCGATGGGGGAGACCCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGAATGTTAAAGGCGGTAGAAAGGTACAAGATTTCGTACATGCCAGTTTCTCCGCCACTCATTGTGGCGCTGGCTAAGTCGGAGTTAGTGGACAAGTACGACCTTAGCTCGCTGAGGTTGCTAGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCCGATAACTTCAAAACCAGATTCCCTGATGTGGAAATAGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGTGGGGCAACGAGAATGATAGGGTCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAAAATGGAAGCCAAGATTGTGGATCCGGTGACCGGAGAGTCATTGCCACCTGGTCAGAAAGGGGAACTATGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTGAGAAATGAGGAAGCAACGGCTGAGACGTTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTACTTTGATTCTGATGGTTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAACATATACTACACACTCACCCTGAAATTGCTGATGCTGCTGTGATTCCGTACCCTGATGAGGAGGCAGGGCAAATTCCAATGGCGTTTGTCGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGAATTTGTGGCAAAGCAGGTTGCACCATACAAAAAGATACGGCGTGTAGCTTTCATTAATGCTATCCCAAAGAATCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTCGATTCTGCACTATGCAGTGCTTCTTCCAAATTGTAA 1656 0.4921 MANQVDPSSGFCPQTRTFHSLRPDVPLPPPSQPLSIIDYALSLIPPTVSSTTVLIDSATGSRISYSLFLQQIKNLTYSLASLTPLSKGQVAFILSPASLHIPVLYYSLLSLGVTISPANPIGSDSEVAHQVELAQPVIAFATSSTVHKIPKLRYGTVIIDSPQFLSMIDGTFGSGNADNRCVRRVQMSQSEPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENEPDPVSLLTLPLFHVFGFFMMIRAISMGETLVLMQRFDFEGMLKAVERYKISYMPVSPPLIVALAKSELVDKYDLSSLRLLGCGGAPLGKEVADNFKTRFPDVEIVQGYGLTESGGGATRMIGSEEAKRHGSVGRLAEKMEAKIVDPVTGESLPPGQKGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNINADEVMEFVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALCSASSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0411 551 Pfam AMP-binding enzyme 51 449 IPR000873 -
Lele18g0411 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Lele18g0411 551 FunFam 4-coumarate--CoA ligase 2 445 545 - -
Lele18g0411 551 SUPERFAMILY Acetyl-CoA synthetase-like 52 542 - -
Lele18g0411 551 Gene3D - 20 444 IPR042099 -
Lele18g0411 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Lele18g0411 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Lele18g0411 551 Gene3D - 445 545 IPR045851 -
Lele18g0411 551 CDD 4CL 49 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0411 Lele-ChrLele18 2410759 2413211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0411 5 551 Monolignol Biosynthesis Gene Families AT5G63380 63.458 0.0 704