Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0396 ATGGCGTCGTTTCAAGCCTCACTGCAATCCAATCACATTCATTCCACGCCAATACCCAGAAGCTTCCTCACCGGCCAAAAACCTGTCCTCAACCTCTCGTTCTCCGGCACCAACTTCCCTTCTCTCAAACTGAAATTCCCCCGCGCCGCCCCCAACCGCCGATCCAACGGCGCCCTCGGAGCTAAGATGTCGGCAACCGCAGCCGCTAGTTACGCCCTCGCCCTCGCCGACGTCGCCAAAGCCAACAACACCCTCGATGCCACCACCTCCGACATCGAGAAGATCGAGGAAGTCTTCTCCGACCCTCAGGTGTTCAACTTTTTCTCCAACCCAATTATCGATATCGAGAACAAGCGCAAGTTAGTGGACGACATTGCGTCCTCCTCGAGCTTGCAGCCCCACACTCGTAACTTCCTCAACATTCTCGTGGACGCCAAGAGGATTGATCTGATCAATGACATAGCGAAGGAGTACGAGTTCGTCTACAACGATTTAACCAACACAGAGCTCGTGGTTGTGAGCTCGGTGGTGAAATTGGAATCGGAGCAGTTATCGCAGATTGCGAAGCAGGTGCAGAAGCTGACAGGGGCAAAAAATGTGAGGATTAAGACCGTGATTGATCCGAGCTTGGTGGCCGGATTCACCGTCAGGTATGGTAATTCTGGATCAAAGTTGATTGATATGAGCGTGAAGAAACAACTTGAGGATATTGCAGCTCAGCTTGATTTGGGTGACATCACACTCACTTCATCAGACTTGCTGTCATTTGCAGCATCTATTCTGGCAGCTCAACTCGCCAAATGGCAAACGATACTGCTCTATGAATCGGCCAGAATCATTGGGTTAGATTGGTATTTGATAGTTTCCAAACTGAGGCAGAGTTTCATAAAGAAGAAGAAATTCCTTCAGTATTGTTCTTATATCTTTCGTGTTCCCTCCGGCGTCTCCGCGAAAACTAGGTGA 963 0.4995 MASFQASLQSNHIHSTPIPRSFLTGQKPVLNLSFSGTNFPSLKLKFPRAAPNRRSNGALGAKMSATAAASYALALADVAKANNTLDATTSDIEKIEEVFSDPQVFNFFSNPIIDIENKRKLVDDIASSSSLQPHTRNFLNILVDAKRIDLINDIAKEYEFVYNDLTNTELVVVSSVVKLESEQLSQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEDIAAQLDLGDITLTSSDLLSFAASILAAQLAKWQTILLYESARIIGLDWYLIVSKLRQSFIKKKKFLQYCSYIFRVPSGVSAKTR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0396 320 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lele18g0396 320 Coils Coil 78 98 - -
Lele18g0396 320 PANTHER ATP SYNTHASE DELTA CHAIN 54 242 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 68 241 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Lele18g0396 320 Gene3D - 67 159 IPR026015 -
Lele18g0396 320 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 167 IPR026015 -
Lele18g0396 320 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0396 Lele-ChrLele18 2356521 2360211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0396 44 250 Primary Pumps ATPases AT4G09650 68.421 1.59e-100 293