Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0389 ATGGAATGCAATAAAGAGGATGCCATGAAGGCTAAAGAGCTTGCTGAGAAGAAGATATTAGAGATGGATCCTGCTGGCGCAAAAATGTTTGCCCTGGAGGCTCAAGACTTGTGTCCTAATCTTGACGGTCTTCCTCAACTGCTAGCAACAATTGAGGTTTATGTCTCTGCTGAAAGAAGAATAAATGGGAAAGTTGATTGGTATAGAGTTCTTGGGGTGGACCCAATGGCTGATGATGAAACTATTCGAAGATGTTATAGGAAACTGGCTCTAACACTACACCCGGATAAAAACAAATCAATAGGTGCAGATGGTGCTTTTAAATTAATCTCTGAAGCGTGGAATTTGCTTTCTGACAAAGCAAAGAAAATCTTGTATGACCAAAGGCGCAATTTTCGGGGTATATATGAAGGAACTCCATATGGGAAGCCTTCTGTACCAGCTGGTGAGAGTGGTTTCTATAATTTCTTCAATAGAGACCCCAGGAGTTCTGCTCATCCCAATCCTGCTCACATGCCTCCTGTGACCCCAAAGCAAACATTTTGGACCATGTGCAATTCTTGCGGAACACAGTTTGAGTACCCTTCAGCTTATCTTAACCACAGTCTTGAATGCATGCTCTGCCATACGCCCTTCATAGCTTTTGCGATGCCTACCCCATCTATATACAGGAATACTTCATCCACCTCAAAAGGAAGAATGAAGAAAACTCCTGCCAAGCACTCATCAGAAACAATTGGTAGATCAAGTCCTTTTTCCATGCCAAGTGGTATTTCCAGTGTAACAACAGCAAGTTCATTTTCTGGCACAGATTCTAATAATAATTTGAAGAGAGGTCATGAAGATAAAACACCTCCTGTCATGATGGAGGAGGCCCGATTTGGGAAAACTCAAACTGTTAAGACAACCGATGCCTTTTCAGCTTTTCAATCCTCTTGTCTTGGCTCCAATTCTGTTCCAAAAAGAGACAGGCCAAGGAAAAAAAGACACATAGATAAGCGCAGAGAGGATAATGATAGAAAAGAGACGGAAGCGGTAATGGCATCTCACCAGGAAGGAATAAGCATGGGTGATGAGCATGGATCTCGTAAGGGTAGTTGTGAGACACAGAGAGTGAATGCTGCTGGAAACTGCAAATATAATGGAATGAGGGATATGCCCCAACTGCAAATAAGGAAAATGTTGATGGACATGGCTAGGAAGGATATTCGAAGGAAGCTTGATGAATCAGGAGTTGCCTCTGTATTAAGGAATTTAGACAAGTCAAGGAATACTAACAAGGAAGCTAAAGAGAAGGGCAAAGAGAGGAGTGGGAATGCTGTGAAATCTGGTGCACAAGAATGTCTAGAGCTTGTTGATTCAGAGACCGGGGGCAAGAATTCCTCCTCTGGTGATACGGATATTCTTGTCGCTGAAGCAACTAATTCTCTGTCTATGAGTGTTCCTGACTCAGACTTTCATGATTTTGACAATGACCGCACCGAAAAAGCCTTAGGCGAGAATCAGGTGTGGGCTGTTTATGATGATGATGATGGCATGCCTCGTTACTATGCTCTGATCCATGATGTAATTTCTTTAAAACCCTTCAAAATGAAGATCAGTTGGCTTAACTCCAAAAGCAATGATGAACTGGCGCCAGTCAAGTGGATTGGTTCTGGCTTTCCCAAGACTATTGGTGATTTCCGGGCAGGCAAGCATGAATTTAATGTCCCAATAAATTCTTTCTCTCATAGAGTTAGATGGAAGAAAGGCTCAAGAGGAGTTATAAATATATATCCGAAGAAGGGGGATGCTTGGGCTCTATACAGGAACTGGTGTCCTGACTGGAATGAACTGACTCCTGATGAAATTGTTCATAAATATGACATGGTCGAAGTACTTGACAACTACAATGAGGAACGAGGTGTGGATGTTGCTCCACTTGTTAAAGTTGCAGGTTTCAAGACAGTATTCTTCAGGCATGTTGATCCTAGAAATGTCAGGAATATTCCCAGGGCTGAGATGTTTCGTTTATCACACCAGGTGCCTGCATACTTGCTCACTGGTCAAGAAGGTGCTAATGCTCCTAGAGGTTGCTTGGAGCTTGACCCTGCTGCTTTACCTATGGAACTTCTTCAGGTGATCACAGAAGCACCGGAGCCGGGAACAGAAACGACGATCGGAAAATCTTCAGCAGATCCAATAGAGCCTAGACAGAATTCTGGAGAAAATGCGGAGGTCAAGACGTTTCAGATAACCAAGGAAAAAGATTCTGCAGAAGATATTTCGAGGGGAGCAGTGTGTCACGTGGCCATTACCCTCTCCCCATAA 2310 0.4325 MECNKEDAMKAKELAEKKILEMDPAGAKMFALEAQDLCPNLDGLPQLLATIEVYVSAERRINGKVDWYRVLGVDPMADDETIRRCYRKLALTLHPDKNKSIGADGAFKLISEAWNLLSDKAKKILYDQRRNFRGIYEGTPYGKPSVPAGESGFYNFFNRDPRSSAHPNPAHMPPVTPKQTFWTMCNSCGTQFEYPSAYLNHSLECMLCHTPFIAFAMPTPSIYRNTSSTSKGRMKKTPAKHSSETIGRSSPFSMPSGISSVTTASSFSGTDSNNNLKRGHEDKTPPVMMEEARFGKTQTVKTTDAFSAFQSSCLGSNSVPKRDRPRKKRHIDKRREDNDRKETEAVMASHQEGISMGDEHGSRKGSCETQRVNAAGNCKYNGMRDMPQLQIRKMLMDMARKDIRRKLDESGVASVLRNLDKSRNTNKEAKEKGKERSGNAVKSGAQECLELVDSETGGKNSSSGDTDILVAEATNSLSMSVPDSDFHDFDNDRTEKALGENQVWAVYDDDDGMPRYYALIHDVISLKPFKMKISWLNSKSNDELAPVKWIGSGFPKTIGDFRAGKHEFNVPINSFSHRVRWKKGSRGVINIYPKKGDAWALYRNWCPDWNELTPDEIVHKYDMVEVLDNYNEERGVDVAPLVKVAGFKTVFFRHVDPRNVRNIPRAEMFRLSHQVPAYLLTGQEGANAPRGCLELDPAALPMELLQVITEAPEPGTETTIGKSSADPIEPRQNSGENAEVKTFQITKEKDSAEDISRGAVCHVAITLSP 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0389 769 MobiDBLite consensus disorder prediction 418 444 - -
Lele18g0389 769 Pfam DnaJ domain 66 127 IPR001623 -
Lele18g0389 769 Gene3D DnaJ domain 63 166 IPR036869 -
Lele18g0389 769 SMART dnaj_3 65 122 IPR001623 -
Lele18g0389 769 Coils Coil 412 432 - -
Lele18g0389 769 MobiDBLite consensus disorder prediction 330 346 - -
Lele18g0389 769 MobiDBLite consensus disorder prediction 714 741 - -
Lele18g0389 769 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele18g0389 769 MobiDBLite consensus disorder prediction 312 346 - -
Lele18g0389 769 CDD DnaJ 66 119 IPR001623 -
Lele18g0389 769 MobiDBLite consensus disorder prediction 243 274 - -
Lele18g0389 769 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele18g0389 769 MobiDBLite consensus disorder prediction 421 438 - -
Lele18g0389 769 MobiDBLite consensus disorder prediction 225 287 - -
Lele18g0389 769 Pfam Domain of unknown function (DUF3444) 477 684 IPR024593 -
Lele18g0389 769 PANTHER BNAC03G44070D PROTEIN 1 701 - -
Lele18g0389 769 SUPERFAMILY Chaperone J-domain 63 142 IPR036869 -
Lele18g0389 769 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele18g0389 769 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele18g0389 769 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0389 Lele-ChrLele18 2307443 2309752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0389 4 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.222 1.02e-25 107