Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0381 ATGGATTGGAATTTGAAGGGTGGCTCTTGGGATTTGACTGAATTAGACGGGGGAGGTCTACCCAACGTAGAAACAAGCAGGTTTGGATTAGTGAACGGAAGTGGAAGCGAATTTTGTGTTGATTTGAAGCTGGGTCAGGTCGGGAATTGTGGGACTGAAGCATCAGGACCCAAGTGGAAAGCTGCCGGCGGCGGCGGAGTCTCGAAAACGGCAGTGTCAGGCACTTCAGGATCATCGAAGAGAGCTCGAGCAATCAACAACGGGGCCCAAACGGCGTCGTGCCTGGTGGATGGGTGCAGTTCAGATCTGAGTAATTGTAGGGAGTATCACAGGCGTCACAAGGTGTGCGAACTCCATTCGAAGACTCCGGTGGTCACCATTGGAGGCCTCAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTCCATTCACTAGAAGAATTTGATGAAGGGAAGAGAAGCTGCAGGAAGCGACTAGATGGGCACAACCGACGGAGAAGAAAGCCCCAACCAGTGCCCCTCGCTCGTTCTGCTACTTTATTCTCGAATTACCACCAAGTTTCAGGGAGGCAGTTACTACGGTTATCATCGGACTCAGATATGTATCCTTCAAGTGCTCCTGTGGTGAACCCAGGTTGGGACTGGGAATGGGATGGTAGGACGATGGTTCATTATCATCATCTTCATAATAAGCCGCATCTATTTCTGGGGTCTTCTGAAAGCGCCAGAATTAAGCAGGAAACGACGACATATCATGAAGCTGCTTCTGCGTGCCACAAGCTTCTGAGGACGACGGCGAGGCCTGGGTCTTTCTCATCGGCGGAGGAGACTCCTCCGCCTTGTGCTCTCTCTCTTCTGTCATCACCGCCGGCACCCATGTACCTGTCGCAGCCTAGTCCAGGCCCCACCACCCTCCACGATCATCACTCCTTACAAGACGCTATGGACACTACACTCCTGGTCAGCAATGGAACTCAGCCTTCGATGTTTAACTTATTAGGGTCTGATGCATCATCCCAGGGGATCCGTACTTCTCAGTCACTTCCATTTCATCGGGAATAA 1059 0.5165 MDWNLKGGSWDLTELDGGGLPNVETSRFGLVNGSGSEFCVDLKLGQVGNCGTEASGPKWKAAGGGGVSKTAVSGTSGSSKRARAINNGAQTASCLVDGCSSDLSNCREYHRRHKVCELHSKTPVVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPVPLARSATLFSNYHQVSGRQLLRLSSDSDMYPSSAPVVNPGWDWEWDGRTMVHYHHLHNKPHLFLGSSESARIKQETTTYHEAASACHKLLRTTARPGSFSSAEETPPPCALSLLSSPPAPMYLSQPSPGPTTLHDHHSLQDAMDTTLLVSNGTQPSMFNLLGSDASSQGIRTSQSLPFHRE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0381 352 FunFam Squamosa promoter-binding-like protein 14 85 155 - -
Lele18g0381 352 ProSiteProfiles Zinc finger SBP-type profile. 91 168 IPR004333 GO:0003677
Lele18g0381 352 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 51 328 IPR044817 GO:0003677
Lele18g0381 352 SUPERFAMILY SBT domain 93 170 IPR036893 GO:0003677|GO:0005634
Lele18g0381 352 Gene3D - 85 155 IPR036893 GO:0003677|GO:0005634
Lele18g0381 352 MobiDBLite consensus disorder prediction 331 352 - -
Lele18g0381 352 Pfam SBP domain 94 167 IPR004333 GO:0003677
Lele18g0381 352 MobiDBLite consensus disorder prediction 331 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0381 Lele-ChrLele18 2265959 2267463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0381 1 212 SBP-box Gene Family AT5G50670 47.436 8.14e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele18g0381 SBP 5.5e-31 No_clan