Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0351 ATGGACTCTGTCTGCAGCAAATGCCAAAAGGAGCACAAGCAGGTGTTGTACATGTTTGGTGATATCACGCCAAGGCCTTCGATTAGCTTCACGGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCTCCTCACGGCCATTCGAGCCCCCTTGATGATCCTATGCCTGCTTCTAGCACTGGAGAAGCAAAATGTGATACTCTTCGTGAGGAAAAAACAGAAGTCAATTTGTCAGAAAGGCTTGGTAAAGCTGCAATGCTGGATGTCGAATCAAGCTCCTTTTCCTGGGATGCGCTATCTTCAGTGCATCATGTTGAATACTGCAGCAGCAATGACCAGGACGACATTAACAAGCCCCTTGAGGTAACTGTGCATTCTGGGGGAATTGTCTTCTTGGCCTTTTTCCGTCACTTTGGGAATGATGATACTTTTCCAAAGGAGGAAGCAGCTGTTATAAAGATATTATCAACAAGATTGGCGACACAATCTGAACCTCTTCGTTATGAATTTGCCAAGTGCTTGGGAGCCCGAACTCCACAGGGTAGAGTAATTCATAATACCAGTCCTGAATGGCTCCAAATAAAGGATGCAGCAGAAAAAGCAAGAGATGCAGCTAATTCTGAAGGAGATGAAACTGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTATTGAAGCTAGACCTTGTCATCCGAAATGAAGATAAGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCGAATTTGTTGTTGACTGAAAAGGTTATCCCAGCAAATATTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTTTATAGACCGAGGGATATCAGGGCACTTCAAAAAGAAAGATGGTCAACTTCATCAGATAGCAGATTGGGTTCTCATAACCCGGGACTTGTATCACAGGGATTCCATATCTTCCTATTAGCACTTCACCAGAAGCTTGATAGCTTGTTAAGATCATTTATGAACATTATGAGCAAATTATCGATGGGGGAATTTGACAAAGAGGATTCACTGGTTTCACCTGACACCATTCTACAGGCAGCTGGAGGTGGCTCCTGTTCCTCTCCAACAAGTAGAGAGAGGTTTGTTAATGATAACCTTCCAGATTTTGATCGAGAATCACAGAAAACTTCTCAAAGGGCAGCATGTTCTGGAAGTAGAGATAGTTCTGAATTTTCTGCTATGACGAGAGAAGGTTGGCAGGGGAAGTTCTCTAAAGGAAGCGGGGAACCACTTCAAAGTCTCCGCTTGACAGCAAAGTTCCGTGACTTCCATAAGTTTGCAAAGGTTGGTTTTCAAGTTTTGTCAGTATTAACCTTGTCTGCTAGTCCCATGGCTGTGGTGTTGCTGGCAGAATTGTCTAGATATCTGGAAAACAATTTCAATAGAGGATTTTTTGAGGCTAGTGATAATCACTGTGCCATTGATGCTTACGAACTGAAGGCTGCAAATTCAGAGAAGCCATCCCGTGTCACAAATAATCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGTGCGAACGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTTGCAAGTCATGTATGCGACCTCGAAGATTCTAACAATAGTAGCATATTTGAAGAAGCTTGTGATCTAATAAGTGATGTTGAAGAAACAGGTCAGAGAATTTTAGTCCATTACTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGATCAGGAAGAAATACACCTTACTTGAAGCATGGAATACTATGAAACGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAAGATGTTAATGGAACTGGATCAGAAACTGCATGGGAAAGTGTCCATGGTGTGGCACCAAAGGAAACCGATGATGAAAATTTGCCCAATCTGTGGAAAGAATGTAGGACTAACCAGCAGCTCTCTGAAGCTGCATCTGCAGAAATCGCACAGAAGACTATCATCAGGAAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTAGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCTACGCAAAGGCAGGCTAACCAAATAAAACTACAAGGTAATGGCAAGCAAGTGTTCCTTTTCTTCAGGTTTCCTTGA 2229 0.4311 MDSVCSKCQKEHKQVLYMFGDITPRPSISFTEWLDLVRKRTAMYRSSGSPHGHSSPLDDPMPASSTGEAKCDTLREEKTEVNLSERLGKAAMLDVESSSFSWDALSSVHHVEYCSSNDQDDINKPLEVTVHSGGIVFLAFFRHFGNDDTFPKEEAAVIKILSTRLATQSEPLRYEFAKCLGARTPQGRVIHNTSPEWLQIKDAAEKARDAANSEGDETVERTSAALGKVLKLDLVIRNEDKLPCRELRWRGNSANLLLTEKVIPANIDTLEEAFDSAMHLYRPRDIRALQKERWSTSSDSRLGSHNPGLVSQGFHIFLLALHQKLDSLLRSFMNIMSKLSMGEFDKEDSLVSPDTILQAAGGGSCSSPTSRERFVNDNLPDFDRESQKTSQRAACSGSRDSSEFSAMTREGWQGKFSKGSGEPLQSLRLTAKFRDFHKFAKVGFQVLSVLTLSASPMAVVLLAELSRYLENNFNRGFFEASDNHCAIDAYELKAANSEKPSRVTNNLFIGGALAARSLYTLQQLGITHIMCLCANEIGQSDSQFPDLFAYKNFFASHVCDLEDSNNSSIFEEACDLISDVEETGQRILVHYFEGKSRSVTLVLAYLMIRKKYTLLEAWNTMKRVHRRAQPNDGFAKMLMELDQKLHGKVSMVWHQRKPMMKICPICGKNVGLTSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPTQRQANQIKLQGNGKQVFLFFRFP 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0351 742 SUPERFAMILY Protein kinase-like (PK-like) 32 281 IPR011009 -
Lele18g0351 742 CDD DSP 500 640 - -
Lele18g0351 742 MobiDBLite consensus disorder prediction 389 404 - -
Lele18g0351 742 Gene3D - 207 318 IPR036940 GO:0016301
Lele18g0351 742 MobiDBLite consensus disorder prediction 45 69 - -
Lele18g0351 742 ProSiteProfiles Dual specificity protein phosphatase domain profile. 499 647 IPR020422 GO:0006470|GO:0008138
Lele18g0351 742 Gene3D Protein tyrosine phosphatase superfamily 479 648 IPR029021 -
Lele18g0351 742 SMART dsp_5 499 644 IPR020422 GO:0006470|GO:0008138
Lele18g0351 742 MobiDBLite consensus disorder prediction 376 404 - -
Lele18g0351 742 Pfam Actin-fragmin kinase, catalytic 216 299 IPR015275 -
Lele18g0351 742 Pfam Actin-fragmin kinase, catalytic 80 207 IPR015275 -
Lele18g0351 742 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 499 647 IPR029021 -
Lele18g0351 742 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 312 726 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lele18g0351 742 Pfam Dual specificity phosphatase, catalytic domain 511 643 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0351 Lele-ChrLele18 2067231 2073437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0351 312 713 Protein tyrosine phosphatase (PTP) family AT5G23720 55.896 3.23e-135 420