LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g0347	ATGGCTCCTCTGAGCGATGAATCTCGCCATTCTCTCGTCCCCGGGTTCCTATACTCATCAAAAGCATTTTCCCCTTTTGATACATTGGCGAAGACGAATCTTGCATTGCCGCGGCCTACGTCGTCCCTTGTTCCAAAGGCATCGCCGCCGGGAAGTAGTTTCTTGATCTCAGCACCGTCCGAGAAGATTGCGATGTTTTCTCCGGCTTACTACGGAGCGTGTACAGTCGGTGGGATCCTCAGCTGTGGTCTTACTCACATGACCGTCACTCCTCTCGATCTTGTCAAGTGTAACATGCAGATTGATCCAGCTAAGTATAAGAGCATCTCTTCGGGATTTGGAGTTTTACTTAAGGAGCAGGGAATGAAAGGTTTTTTCCGAGGGTGGGTGCCGACTCTGCTTGGTTATAGTGCTCAAGGGGCGTGCAAATTTGGATTTTATGAGTTCTTCAAGAAGTATTACTCAGACATTGCAGGGCCAGAATATGCAGCCAAGTACAAAACATTGATATATCTGGCTGGTTCTGCCTCAGCGGAGGTGATTGCCGATGTTGGTCTTTGCCCCATGGAGGCTGTCAAAGTTCGTGTTCAAACTCAGCCCGGCTTTGCTCGAGGTTTGTCAGATGGATTGCCCAAGTTTGTCAAGGCCGAGGGTGCTCTTGGGTTGTACAAAGGACTTGTTCCTCTCTGGGGTCGTCAGATTCCATATACGATGATGAAATTTGCATCTTTTGAGACGGTTGTGGAGATGTTTTACAAATACGTCATTCCCAAACCTAAAGAGCAATGCAGCAAAAATGTTCAGCTGGGAGTAAGTTTTGCAGCAGGGTATGTGGCCGGAGTGTTCTGTGCCATCGTCTCGCACCCTGCTGATAACCTCGTTTCATTCCTCAACAACGCCAAGGGAGCCACTGTTGGCGATGCTGTTAATAAGTTGGGGCTATGGGGGCTTTTCACTCGTGGCCTTCCACTTCGTATAGTTATGATTGGAACCCTCACCGGAGCTCAGTGGGGAATCTATGACGCTTTCAAAGTATTCGTGGGACTGCCAACGACTGGGGGAGGTGCTCCTACTTCTGCAGCAGCACAGGCTGCAAAGGCTTAG	1104	0.4937	MAPLSDESRHSLVPGFLYSSKAFSPFDTLAKTNLALPRPTSSLVPKASPPGSSFLISAPSEKIAMFSPAYYGACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGMKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVGLCPMEAVKVRVQTQPGFARGLSDGLPKFVKAEGALGLYKGLVPLWGRQIPYTMMKFASFETVVEMFYKYVIPKPKEQCSKNVQLGVSFAAGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVNKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGGAPTSAAAQAAKA	367

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g0347	367	PANTHER	SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED	58	356	IPR044677	GO:0005315\|GO:1990547
	Lele18g0347	367	FunFam	Phosphate carrier protein, mitochondrial	69	347	-	-
	Lele18g0347	367	Gene3D	Mitochondrial carrier domain	73	347	IPR023395	-
	Lele18g0347	367	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	69	153	IPR018108	-
	Lele18g0347	367	Pfam	Mitochondrial carrier protein	170	254	IPR018108	-
	Lele18g0347	367	Pfam	Mitochondrial carrier protein	73	155	IPR018108	-
	Lele18g0347	367	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	166	250	IPR018108	-
	Lele18g0347	367	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	267	346	IPR018108	-
	Lele18g0347	367	SUPERFAMILY	Mitochondrial carrier	72	342	IPR023395	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g0347	Lele-ChrLele18	2037702	2040213	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g0347	6	367	Chloroplast and Mitochondria Gene Families	AT5G14040	75.401	0.0	553

Showing 1 to 1 of 1 entries