Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0346 ATGGCAGCTTTTTCATTCCAATACCACCCTTTCCTTGTTGACTCTCCATTTTTCTCTAGTGCTCCCTTTAAGATGACAGCTTTAACTGAGCAACCTCAGGTTCAGGCCCAGCCTCATACAAATCCTGCTCCTCAGTTTCACGAGACATCTTTGGAGAATTGCTTCGTTGATCAAACCTCCAAGCTTAACATGAGTGATAATGAGCCTTCTTCAGTGAGCAAAAACCAGAGCCCTGAGACCTCTGTGGTATTGGATAAGCTTGAACCTGGTGAGCAGGTCACTCAGAAGGTGGCTCCCATGGAGAAGAAGAAGAGGAACAGGAATCGTTCTTCCTTGAGTCGTCCTCAATCTAAGGAAGCTACCGGAGAAAGAAACAAGAGACAAAAGAAGAGCAATAATGGTGAGGCGAAGGAAGGAGATAAGCCAAAAGATGAGAAGAAGAATCAGAAGAAGAGTCCTGAAGAACCTCCAACAGGCTATATCCACGTAAGAGCAAGAAGAGGTCAGGCAACCGATAGCCACAGCCTAGCTGAAAGGGCACGAAGAGAGAAGATAAGTGAGAGGATGAAGATGTTGCAGCGACTTGTACCAGGTTGTGATAAGGTGACTGGGAAAGCCCTGATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTGGAGTTCTTGTCAATGAAGCTTGCTTCTGTGAATCCTATGTTCTATGACTTCACAATGGACCTTGACTCCCTCGTGGTCAGACCAGAGAAATCAAATTGTGTAGCATCACCACTGCAATCTGTGCCACAATGCAGCCTCAACCAGACCACTACTTTTGCCGATACAACCACCGTTACTGCCACCGCGACCGCCAGCTGTCCGACTGCTAATGACTATCCATTGGACAATTTAGCTTCTTTTTTTCTTCAAGGACAGAGGTCTAATGTCATATCTGAGTACACAGGTAGTCAATTCTGGGACATAGAAGACCCACGCCAAAAGTTTCTTCATCCATATGGGATCAACAACAGCAGCTTATGTTTCTTTCATTAA 1041 0.4496 MAAFSFQYHPFLVDSPFFSSAPFKMTALTEQPQVQAQPHTNPAPQFHETSLENCFVDQTSKLNMSDNEPSSVSKNQSPETSVVLDKLEPGEQVTQKVAPMEKKKRNRNRSSLSRPQSKEATGERNKRQKKSNNGEAKEGDKPKDEKKNQKKSPEEPPTGYIHVRARRGQATDSHSLAERARREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFTMDLDSLVVRPEKSNCVASPLQSVPQCSLNQTTTFADTTTVTATATASCPTANDYPLDNLASFFLQGQRSNVISEYTGSQFWDIEDPRQKFLHPYGINNSSLCFFH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0346 346 MobiDBLite consensus disorder prediction 167 181 - -
Lele18g0346 346 Gene3D - 166 238 IPR036638 GO:0046983
Lele18g0346 346 MobiDBLite consensus disorder prediction 61 82 - -
Lele18g0346 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
Lele18g0346 346 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 48 273 IPR024097 GO:0006355
Lele18g0346 346 Pfam Helix-loop-helix DNA-binding domain 173 220 IPR011598 GO:0046983
Lele18g0346 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 236 IPR036638 GO:0046983
Lele18g0346 346 SMART finulus 175 225 IPR011598 GO:0046983
Lele18g0346 346 CDD bHLH_AtBPE_like 159 244 - -
Lele18g0346 346 FunFam Basic helix-loop-helix transcription factor 166 238 - -
Lele18g0346 346 MobiDBLite consensus disorder prediction 61 181 - -
Lele18g0346 346 MobiDBLite consensus disorder prediction 119 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0346 Lele-ChrLele18 2026270 2028012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0346 115 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 66.906 1.11e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele18g0346 HLH 1e-06 No_clan