Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0344 ATGCAAACAACCGACACCTCCGATCAACTTCTTTCCTCACTTCTCTACGAAATTCCCACCATTCTTCACTTCAAAGGTAAGTGGTCCTTCATCACTTCAAAACTCCACCTTCTTCACTCTCGACTTGCCGATTTCTCCTCCCATTTCCCCTACTCTTCATCCTTCAACTCTCTCTCCAGAGACCTTCTTCTCTCCATAGCTCAGACGCTCAACGACGCCGTTTTCCTCGTCAAGGATTGCCAGTCCCCCACCTTGTCCCACGGCAAGCTCAAGACCCAGAGCCTCGTGGATTCACTCCTTGCCAGCCTCGATCGCCATCTCTCAGACTGCAATGTTCTCTTCAAAAGCGGCGTACTTCAGGACGACGCAGTTTCAACTGCGTCTAAAAGGGACGCTGTTCTATATGAATCCAGGAATTTGACCGCTCGTTTGCAAATTGGGTCCTCTGATTCTAGGATCCTGGCCATGGACTCCTTTCTGGGTTTACTGCAAGAGGATGATAAGAATGTGATGATAGCTGCGGCGCAGGGTGTGGTTCCCGTGCTCGTTCGCTTACTGGATTCGAGCTCTTCGGAAATGAAGGAGAAGATCGTCGCTGCGATATCCAGAGTTTCAACAGTGGATGGCAGCAAGCATGCATTAATTGCCGAAGGTTTGGTGCTTTTGAATCATCTGCTTCGAGTTCTTGACCATGGAAGTGGGTTTTCTAAAGAGAAAGCTTGTATTGCCCTCCATGCACTAACGTTCTCTAAGGAGAACGCGAGGACAATCGGGTCTAGAGGTGGAATTTCTTCTCTATTGGACATTTGCCAAGAAGGCACGCCTGGTTCCCAAGCTTCCGCAGGTGGAGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCAGACAAAATTTCGTCGAGGAAAATGCGGTGGTTGTTTTGTTAGGGCTCGCTTCTTCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAATCTAATTTCTGATGACGAAAGCTTGAAATTAATGAGTGTTAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCAGTTCCGTCCGTTCAGAGTCTTGAAGTAGCAATTGAGTTATTAAGAAGCCTGGCTTCGAGTCCACCGATTGCTGAAGTTCTTATTGCGGATGGGTTTATTCAGAGACTTGTGGGCGTGTTACATTGTGGTGTATTGAGGGCGAGAATTGCAGCCGCTCGAGCTGTTTATGCTCTCGGGTCCAGCACCACAAAGGCGAAGAAAGAGATGGGCGAATGTGGATGCATTACTCCATTGATAAAGATGTTAGACGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCTTTATCAATACTCTTGTTACATAAAGGCAATAGAAGGATTTTCCGAAAGGATGAGAGGGGTACAGTGAGTGCGGTTCAGCTGCTGGATCCTTCAATACGGAATTTGGACAAGAAATACCCAGTTTCCATTCTGGTCTCACTTGTGCATTCAAAGACTTGTAGAAAACAAATTGCAGCAGCTGGTGCTAGTGTACATACAAGAAAACTTGTAGAGATGAATGTTGAGGGATCCAAGAAACTCTTGGATAGCCTTGGTCGTGCAAAGATATGGGAAGCATTTACAAGATCCCTGGGATGA 1650 0.4661 MQTTDTSDQLLSSLLYEIPTILHFKGKWSFITSKLHLLHSRLADFSSHFPYSSSFNSLSRDLLLSIAQTLNDAVFLVKDCQSPTLSHGKLKTQSLVDSLLASLDRHLSDCNVLFKSGVLQDDAVSTASKRDAVLYESRNLTARLQIGSSDSRILAMDSFLGLLQEDDKNVMIAAAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDGSKHALIAEGLVLLNHLLRVLDHGSGFSKEKACIALHALTFSKENARTIGSRGGISSLLDICQEGTPGSQASAGGVLRNLAVFPEVRQNFVEENAVVVLLGLASSGTAIAQENAIGCLSNLISDDESLKLMSVKEGGIECLKNFWDSVPSVQSLEVAIELLRSLASSPPIAEVLIADGFIQRLVGVLHCGVLRARIAAARAVYALGSSTTKAKKEMGECGCITPLIKMLDGKAVEEKEAAAMALSILLLHKGNRRIFRKDERGTVSAVQLLDPSIRNLDKKYPVSILVSLVHSKTCRKQIAAAGASVHTRKLVEMNVEGSKKLLDSLGRAKIWEAFTRSLG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0344 549 Gene3D - 355 535 IPR011989 -
Lele18g0344 549 SMART arm_5 166 206 IPR000225 GO:0005515
Lele18g0344 549 SMART arm_5 291 331 IPR000225 GO:0005515
Lele18g0344 549 SMART arm_5 250 290 IPR000225 GO:0005515
Lele18g0344 549 SMART arm_5 417 457 IPR000225 GO:0005515
Lele18g0344 549 SMART arm_5 332 374 IPR000225 GO:0005515
Lele18g0344 549 SMART arm_5 375 415 IPR000225 GO:0005515
Lele18g0344 549 Gene3D - 128 354 IPR011989 -
Lele18g0344 549 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 545 - -
Lele18g0344 549 SUPERFAMILY ARM repeat 140 479 IPR016024 -
Lele18g0344 549 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 219 IPR000225 GO:0005515
Lele18g0344 549 Pfam Armadillo/beta-catenin-like repeat 167 203 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0344 Lele-ChrLele18 2005958 2007607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0344 123 403 U-box Gene Family AT2G23140 27.562 3.66e-17 82.8