Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0343 ATGGCTTCAGCAGGGGCCCTGGACGAGGGCAGGGCCGAACCCCGTCCGTTGGGGAAAACTGAAAAGGCCGCGTATACTATTTTGTCTGCTTTTGACCCTGGCTTTAGCGCCCTAACTTTAGTGCAAGTTACCTGTAAATTTTTATTGAGACTGCTTGCGCCAACTTCTCCATCTGTAGCTAAATCCTCTGGATGCAAGATGGATGACGGCCACCAGCGTGAAAACGGCAGACAGAAGGTGGACTACTATAGAGGAGCTCATTCCCTGTGGAATATCGCTCCCCAGCATCAGGTAAAGGAACCAAATGCCCTGGTTATGAATAAGAAAATTATGTCTGTTATTGCTGAGAGAGAAGCTGCAATTCGCGAACGGAATGCGGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGACAATGCCCTTCGGCAGAGGGATGAAGCACTTCTGCAGAGGGATAATGCCTTGATGGAACGGGCTAATGCTCTCGCTGCACTTCAAATCCAGGATAATGCTACCTACTTCTCGTTGGGTTGTGGCACTCAACGTGGATCAAAGCGGATGCACCATTCCTCGAATCATTTTGGTCAAATTGCAGAAGGTGCTTATAGAACAAAGGATTTGACCACAACCGATGCCTTCCCGGTGACTATTGTAGCTTCTGAAGCGGGCAAGTATAATCAGGCTAATAAGAGAACAAGGGAGAACAAGGCAGATTCTTCTAAGGCATCAAAACCACTAGGTAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCGGGCTTCTTCTGAAGGGACAAAGATCAAATCTGAGTGGGATAAACAAGATGTTGGATTGAATTTGATTCTATTTGATGAAAATATCATGCCAGCCCCTGTTTGCACATGTACCGGAGCACCACGGCAATGCTACAAATGGGGTAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTGTCCATGTATCCATTACCGCAGCTTCCAAACAAGCGACATGCGCGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTTAGCAGGGTGGCCGCACAAGGCCGTGATTTATCTATACCATTAGATCTCAAGGACTATTGGGCCAGACATGGAACAAATCGCTACATCACAATCAAGTAA 1149 0.4708 MASAGALDEGRAEPRPLGKTEKAAYTILSAFDPGFSALTLVQVTCKFLLRLLAPTSPSVAKSSGCKMDDGHQRENGRQKVDYYRGAHSLWNIAPQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDNALRQRDEALLQRDNALMERANALAALQIQDNATYFSLGCGTQRGSKRMHHSSNHFGQIAEGAYRTKDLTTTDAFPVTIVASEAGKYNQANKRTRENKADSSKASKPLGKGKKVSEDLNRRASSEGTKIKSEWDKQDVGLNLILFDENIMPAPVCTCTGAPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAQGRDLSIPLDLKDYWARHGTNRYITIK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0343 382 MobiDBLite consensus disorder prediction 227 269 - -
Lele18g0343 382 PANTHER - 67 382 IPR010409 -
Lele18g0343 382 MobiDBLite consensus disorder prediction 228 269 - -
Lele18g0343 382 Pfam GAGA binding protein-like family 67 382 IPR010409 -
Lele18g0343 382 SMART GAGA_bind_2 67 382 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0343 Lele-ChrLele18 2000899 2003605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0343 67 382 BBR or BPC Transcription factor family AT2G21240 58.360 1.91e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele18g0343 GAGA_bind 1e-97 No_clan