Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0337 ATGAAAAAGATGAATTTTATGAAGAATGGAGTTTGCAGATTGCCTCCTGGATTTAGGTTCCAGCCAACAGATGAAGAACTTGTGTTTCAGTATTTGAAATGCAAGGTTCTTTCATGTCCACTTCCTACATCGATCATTCCTGAAGTCAATCTCTGCAACTACGATCCTTGGGATTTGCCAGGGAATTGTGAAGAGCAAGAGAGGTACTTCTTCAGTTACAAGGAAGCGAAATACAGAAATGGTAATCGCATGAACCGAAAAACCAAGTCTGGTTATTGGAAGGCAACTGGTTCAGACAAGAAAATAATATCATCTCCAACATGTAAAAGCAATAATTATAATTTTTCTGGGGTGAGAAAAACCCTAGTTTTTTACCAAGGGAAGGCTCCAAACGGCTCTAGAACTAACTGGGTCATGCACGAATATCGCCTTGTTATTGCGGAAACCAGTGCTCCCAACTCAACCCAACCGAGTCATGGGAAGGAGGTAGGAGATTGGGTTCTGTGTCGGATAAGCATGAAGTCGAGAAGAGAAGGTGATGGTGTAGGAGAGAGAAGATTCTTTGATTTTATGAGCGTACGAAGGGTTGCTGCAGAAGAACAACGTTATTCTGACACGTCATCGTCTTGTTCAAGTTCAAGTGACATTACAGAGGTTTGTTCAGGCGAAGCAGATCATGAAGAAACAAATGGCTATAGCTATACTCATAAGATCGAACCCCTTATAGACAGATATGTCTGA 741 0.4143 MKKMNFMKNGVCRLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEVNLCNYDPWDLPGNCEEQERYFFSYKEAKYRNGNRMNRKTKSGYWKATGSDKKIISSPTCKSNNYNFSGVRKTLVFYQGKAPNGSRTNWVMHEYRLVIAETSAPNSTQPSHGKEVGDWVLCRISMKSRREGDGVGERRFFDFMSVRRVAAEEQRYSDTSSSCSSSSDITEVCSGEADHEETNGYSYTHKIEPLIDRYV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0337 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 202 - -
Lele18g0337 246 SUPERFAMILY NAC domain 8 174 IPR036093 GO:0003677|GO:0006355
Lele18g0337 246 Pfam No apical meristem (NAM) protein 15 144 IPR003441 GO:0003677|GO:0006355
Lele18g0337 246 Gene3D NAC domain 23 179 IPR036093 GO:0003677|GO:0006355
Lele18g0337 246 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0337 Lele-ChrLele18 1968614 1969540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0337 1 176 NAC Transcription Factor Family AT5G13180 59.659 1.55e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele18g0337 NAM 1.4e-34 No_clan