Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0320 ATGGAGCTCTGCCAAGGTGGAGAGCTGTTCGACAGGATAGTGCAGAAAGGGCATTTCAGTGAGAGGATAGCGGCTACGTTGATCAGGACCATTGTTGAGGTTGTCCAAGCTTTTCATTCTCTTGGGGTCATGCATAGAGACCTCAAGCCAGAGAACTTCTTGTTCGATAGCGTTGAAGAGGATGCTAAACTTAAAGCGACTGATTTCGGATTGTCTGTTTTCTACAAGCCAGGGATTGGAATGACGTCTGGGCTAAGAATGCTTCCTGCTTTTAGCGCTTGCTTGCACCTTATATATGCAGCAGTAGTTTGTGAAACCTTTTCTGATGTTGTTGGGAGCCCTTATTATGTCGCACCAGAGGTGTTACGCAAGCATTATGGACCCGAGTCAGATGTTTGGAGTGCTGGGGTTATTTTGTACATCTTATTAAGTGGGGTGCCACCTTTTTGGGCTGAAAGTGAAATAGGGATCTTCCGACAGATTTTACAAGGAAAACTTGATTTTCAATCAGAACCATGGCCTAACATCTCAGAAAGTGCCAAGGATCTAATTAGAAAAATGCTTGATCAAAATCCAAAAAAGAGGCTTACAGCCCATGAAGTACTCAGCCACCCATGGATTGTTGATGACAATATTGCACCTGATAAACCCCTTGACTCTGCTGTTTTATCACGCCTGAAACAGTTCTCTGCAATGAATAAGCTTAAAAAGATGGCTTTACGTGTTATTGCTGAGAGGCTCTCTGAGGAAGAAATTGGTGGACTGAAGGAGTTATTCAAGATGATTGACACAGACAACAGCGGAACCATAACTTTTGACGAGTTAAAAGATGGTTTAAAGCGAGTGGGGTCTGAACTCATGGAGTCTGAAATCAGGGATCTTATGGAAGCGGCGGATATTGATAATAGTGGAACAATTGACTATGGCGAATTCATTGCTGCAACTATCCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCAGCTTTCTCATATTTCGATAAAGACGGCGATGTCCATATCGATGAAATGATCAAGGAAATTGATCAAGACAATGATGGACAAATAGATTATGCGGAATTTGCTGCGATGATGAGGATGGGCAATGGAGGGATTGGGAGGCGAACCATTAGGAACACACTAAATTTCAGGGATGCTCTGGGATTGATAGGCACTGGCTCTAATGACATTATGAATGGTTAG 1206 0.4287 MELCQGGELFDRIVQKGHFSERIAATLIRTIVEVVQAFHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPGIGMTSGLRMLPAFSACLHLIYAAVVCETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAESEIGIFRQILQGKLDFQSEPWPNISESAKDLIRKMLDQNPKKRLTAHEVLSHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIRDLMEAADIDNSGTIDYGEFIAATIHLNKLEREENLLSAFSYFDKDGDVHIDEMIKEIDQDNDGQIDYAEFAAMMRMGNGGIGRRTIRNTLNFRDALGLIGTGSNDIMNG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0320 401 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Lele18g0320 401 FunFam Calcium-dependent protein kinase SK5 9 219 - -
Lele18g0320 401 Gene3D - 248 316 - -
Lele18g0320 401 Gene3D - 342 400 - -
Lele18g0320 401 ProSitePatterns EF-hand calcium-binding domain. 350 362 IPR018247 -
Lele18g0320 401 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Lele18g0320 401 Gene3D Transferase(Phosphotransferase) domain 1 1 228 - -
Lele18g0320 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Lele18g0320 401 ProSiteProfiles EF-hand calcium-binding domain profile. 337 372 IPR002048 GO:0005509
Lele18g0320 401 SUPERFAMILY Protein kinase-like (PK-like) 1 227 IPR011009 -
Lele18g0320 401 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 362 - -
Lele18g0320 401 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Lele18g0320 401 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Lele18g0320 401 CDD STKc_CAMK 1 206 - -
Lele18g0320 401 CDD EFh 255 314 IPR002048 GO:0005509
Lele18g0320 401 Pfam EF hand 342 368 IPR002048 GO:0005509
Lele18g0320 401 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0320 401 SUPERFAMILY EF-hand 246 367 IPR011992 -
Lele18g0320 401 SMART efh_1 290 318 IPR002048 GO:0005509
Lele18g0320 401 SMART efh_1 341 369 IPR002048 GO:0005509
Lele18g0320 401 SMART efh_1 254 282 IPR002048 GO:0005509
Lele18g0320 401 FunFam calcium-dependent protein kinase SK5 244 316 - -
Lele18g0320 401 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0320 401 Pfam Protein kinase domain 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0320 401 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Lele18g0320 401 Gene3D - 229 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0320 Lele-ChrLele18 1877225 1880376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0320 1 397 EF-hand Containing Proteins AT1G35670 70.406 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele18g0320 Pkinase 4.8e-49 CL0016