Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0304 ATGTCTCCCTCCTTCGTCTCCTTCTCTCCCATCAATGTTCATGCTGCAGTAACCAGTGAGTCCCCCATGTCTCCTCCAGCTTGTGAATATTCCTCGGAGATCAAACGGGCTTATATTCCTCTAAATCGAATGACCAGGTGGCTGCTGGTATTCTTGGCCATCTTAGGACTCAGCTGGGCAACTACTGGTCCTGATGTGGAAGGTGAAGCTTTGTTAGATTTTTTGAAGGTTCTCAATGATTCCAACCATCCGATGACAGATTGGAATAGTTTTCTTGTAAGCCCTTGCTTTAGTTGGTCTCATGTCACATGTAGAGATGGACATGTCATATCTCTGAGCTTGGGTTCGAAAGGATTTTCTGGAACACTGTCTCCTTCAATTACCAAATTGAAGTACTTGATTACCTTGGAATTGCAGAACAATAGCCTTTCAGGTTTCTTACCTGATTATATTGCCAACTTGACACGTCTGCAATATCTAAATCTTGCTGACAATAATTTCCATGGTTCTATACCATCTGCATGGGGTCAAATTTCCTCTCTGAGGACTCTGTTATTGAGAGGGAATGGCTTGTCTGGATCCATACCCATTTCTGTTGAAAATCTCAGTGGGTTATCAGAATTGGATCTTTCTTCTAATCATTTAACTGGAACCATCCCAAAGCACCTCTTTTCAGTTCCAATCTTCAACTTTTCAGATACGGACCTTCATTGTGGCTCTAGCTTGGATCAGCCTTGTGTTTCTAATTCAGCTATTCCAGCTTCAACCACCAAATCAAAACTTGCAGTGGCTTTAAGTTTGGCGAGTTGTGGCGCCTTCGGAATTCTGTGTCTAGGGGTCATCTTTACCTATGCATACCATTACATTCAAGGACAAAAAAATGATGTTTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAGATCTCATTTGGGCAACTGAGGAGATTTTCTTTGCGTGAACTTCATCTAGCTACAAAAAATTTCAGTGAAAGCAACGTGATTGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGAGTACTCTCAGATAATACAAAGATTGCAGTTAAACGCCTTGCCGATTATCATAATCCTGGTGGAGAAGCTGCATTCCAAAGAGAAGTTCAACTCATAAGCGTTGCAGTTCATAGAAATCTCCTTCGTTTGATTGGTTTCTGTACAACCTCAACCGAAAGAATCCTCGTATACCCTTTCATGGAGAATCTAAGTGTTGCATATCGTTTGAGAGATTTGAAACCTGAAGAGAAGGGTCTGGATTGGCCAACAAGGAAACGTATAGCATTTGGTACAGCACGTGGATTGGAGTATTTGCACGAGCAATGCAATCCTAAGATCATACATCGTGATTTAAAGGCAGCAAACATCTTATTAGATTATGAATTTGAAGCAGTTCTGGGAGATTTTGGGCTAGCTAAGCTGGTTGACACAAGACTAACTAGTGTTACCACTCAAGTGAGGGGCACAATGGGACATATAGCCCCAGAATACTTGTCCACAGGAAAATCATCAGAGAAAACAGATGTTTTTGGATATGGCATAACACTTCTTGAAATTGTCACAGGTCAACGAGCAATCGACTTCTCCCGGCTGGAAGAGGAGGAGGATGTTCTTCTGCTAGATCACATTAAGAAGCTGCTGAGAGAGAAGAGGATAAAGGACATAGTGGACAAGAATTTGGAGAGATATGATGCAAAGGAAGTGGAAAGGATTATTCAGGTGGCTTTGCTTTGCACGCAAGGCTCGCCGGAGGATCGACCGAGCATGTCAGAGGTGGTGAATTTGCTGAATGGGGAAGGTTTGGCGGAGAGATGGGGTGAGTGGGAGATAATGGAAGAGATGAACGATAGAGAAATGTCACTCTTGTCTCACCAATTTGCTTGGGCTGATGAATCTACGCACGATCAAGAGGCTATTCAACTTTCCTGGGCAAGATAG 1953 0.4265 MSPSFVSFSPINVHAAVTSESPMSPPACEYSSEIKRAYIPLNRMTRWLLVFLAILGLSWATTGPDVEGEALLDFLKVLNDSNHPMTDWNSFLVSPCFSWSHVTCRDGHVISLSLGSKGFSGTLSPSITKLKYLITLELQNNSLSGFLPDYIANLTRLQYLNLADNNFHGSIPSAWGQISSLRTLLLRGNGLSGSIPISVENLSGLSELDLSSNHLTGTIPKHLFSVPIFNFSDTDLHCGSSLDQPCVSNSAIPASTTKSKLAVALSLASCGAFGILCLGVIFTYAYHYIQGQKNDVFVDVSGEDESKISFGQLRRFSLRELHLATKNFSESNVIGQGGFGKVYKGVLSDNTKIAVKRLADYHNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPEEKGLDWPTRKRIAFGTARGLEYLHEQCNPKIIHRDLKAANILLDYEFEAVLGDFGLAKLVDTRLTSVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEDVLLLDHIKKLLREKRIKDIVDKNLERYDAKEVERIIQVALLCTQGSPEDRPSMSEVVNLLNGEGLAERWGEWEIMEEMNDREMSLLSHQFAWADESTHDQEAIQLSWAR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0304 650 SUPERFAMILY L domain-like 67 229 - -
Lele18g0304 650 Gene3D Ribonuclease Inhibitor 64 248 IPR032675 -
Lele18g0304 650 Pfam Protein kinase domain 329 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0304 650 FunFam Leucine-rich repeat receptor-like protein kinase 64 221 - -
Lele18g0304 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Lele18g0304 650 SUPERFAMILY Protein kinase-like (PK-like) 306 601 IPR011009 -
Lele18g0304 650 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Lele18g0304 650 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0304 650 FunFam Somatic embryogenesis receptor-like kinase 1 405 621 - -
Lele18g0304 650 Gene3D Transferase(Phosphotransferase) domain 1 405 620 - -
Lele18g0304 650 Pfam Leucine rich repeat N-terminal domain 66 104 IPR013210 -
Lele18g0304 650 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 46 611 - -
Lele18g0304 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Lele18g0304 650 FunFam Somatic embryogenesis receptor kinase 1 297 404 - -
Lele18g0304 650 ProSiteProfiles Protein kinase domain profile. 328 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0304 Lele-ChrLele18 1789364 1792697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0304 47 650 Receptor kinase-like Gene Family AT5G10290 58.456 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele18g0304 Pkinase 1.6e-44 CL0016