Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0299 ATGGGAGGGAACAGTATGATTATGTCCTCGGATTCTGCATTCAATTCCAGCCTCATGATCTTGCAGTTGGTTAAGATGGACCGTCGGAGTTGGTTATGGCGCAGGAAATCATCTGACAAGAATCTAGCCGAAACAGAGAGTTCGGGATCAATGCCATCTCATTCGGAAAGGTTCTTCGATGATCAGGCATATCCAACCCAAATTACTAGTACATCGCCGGAAGTCATGTCTAAGGCTGCATCAGATGAAGAAGAGGTTACTGATGTAAAGATTCTAAAAGAAAATTTATGTGCTGCTCTCCTAAGCATTAGTGTCAAAGAAGACTTGATAAGGCAGCATGCAAATGTTGCGGAGGAAGCAATCTCAGGCTGGGAGAAGGCTGAGGATGACGTGTTGTCTTTTAAACAACAACTTGACGCTGCAAAGAAGAACAATTCACATCTTGAAGAACAAGTTAGTCAACTTGATAGGGCACTCAAGGAGTGTGCAAGGCAGCTTCGACAAGCTAGAGAAGAGCAAGAGCAAAAAATCCATGAAGCTGTTGCAAACAATTCTCTCGTCTGGGAATCAAAAAAATCAGAGCTTGAGGCCCAGCTTCAAACAGCTAAAGCAGAAACTACCACATCAATTAGCTCTGATCTTAGACAGAAACTCGAGGCAGTGGAGAAAGAGAATGCAAGCCTTAAACTTGAGCTACAATCTCGACTTGAAGAACTCCAATTCATGATCACTGAGAGGGATTTAAGTACACAAGCTGCAGAAGCAGCAAGCAAGCAACATTTGGAAATCATTATGAAGATCGCTAAGCTTGAAGCTGAGTGCAGGAGACTAAAAGCCGTAGCTCATAAAACATGCTCTGCTAATGATCACTTGTCTTTGGTGGCTTCCTCAGTTTATGTAGATTCCTTCGCAGATAGCTTGTCAGAAAGTGGAGAGAGGCTACATACAGTCGAAAATGATGCCAGTGAATTTGAGCCAAGTCGTTCAAACTCATGGGCATCTGCTGTGATTACTGAACTTGATCAATTTAAGAATGAAAAGACTGCTGGAAAAAATCGTATGGCCGCTTCAATCGAGATTAATCTCATGGATGATTTCCTTCAGATGGAAAGGCTTGCTGCTTTGCCAGACACAGAGAATGGAAGCAGTTTCCTTGAGGCAGCACTGTCACTAGATCAACCTAAAATTGACCAAAACACGACCAAAACTTATTTGGAATCTTTGATTCAAAGGAATTCTGAATTGCAGGAACAACTAAAGAAGATGGAGGCTAATAGACTTGAGGTTGAGATGGAATTAGCTGAGTGCCGAGAGCAGCTACATGCATCACAGAGTCAAATAAAGGATGCGGAGTTGAAGATTGCCGAACTTCAGACTCAGTTAGATCTCGCAAAGAAATCAAATCGAGAAGCATATGAAGAACTAGAGGAAGCCAAAACAAAGAATGAGGTAGCGGATTCAAAACTCCCAGTTCTTCAAACTGAGGTACAGGAATTGGTTTCAAAAATCGGTTCATTGGAGGAAGAGATTCAGAAGGAGCGATCTTTGTCAGCTGAGTATAATGCCAAGCGTGAGAATTTGGAGGATGAACTTTCAAGAATGAAGCATGATGCTCAGCTTCAGAGAGAAGCCGAGGTACTGGAGAGGGAAGTAATTACTTGCGAGTTGAAGTTAAAGCAGGAGAAGGAACTTTCCTTGGCTGCTAGTAGATTTGCAGGGTGCCAGAGAACCATTGCATCTCTTGGTCAGCGGTTAAAGTCTCTTGAAACATTGGAAGACCTCCCACAGGATTCCCAGAAACCCATGGAGCTAATAACTAGTGAAGTTAAACAGAGTCCCAAAAGTGCAGATCAACTCTTAAAATTACGCCATAGCGATTTGAATTTCCAAAAAAGAGAATCAGTGTCCTCAATATCGAGAAACCCATACATCGCCTCTGAGAAAAGCCGTAATGGTTTTGGAAAGCCCGACCGCCTAAAAGGAAACTTGGAGAGTGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGCCATGGGAGATGGCAATGGCGCCACCGGCACCAATCGGTCCAACAACAACAGTAATAAGCCCGAGTGGCTACAACAGTACGATCTGATTGGGAAAATTGGGGAAGGTACCTATGGTCTTGTATTCCTCGCAAGGATCAAGTCTGCCACGAATCGTGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCTAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCCGGGAGATAACACATGAAAATGTTGTGAAGCTCGTGAATGTTCACATCAATCGTGCGGATATGTCTCTGTACCTTGCTTTTGATTATGCTGAACATGACCTTTATGAAATCATTCGGCATCACAGGGACAAAGTCAACCATTCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGTTGCTCAACGGACTAAACTATCTGCATAGTAATTGGATAATTCATCGAGACCTTAAGCCATCGAATATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCATTAAAGTCATTATCTGAAAATGGAGTTGTTGTTACCATATGGTATCGTGCACCTGAGTTGCTTCTTGGGGCTAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCCGAGCTGTTAACACTAAAGCCACTATTTCAAGGAGCAGAAGTCAAAGCGACACCTAATCCATTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTACCCTAGCATACCTTCCCCACTGGCAACAAGATGTTCAGCATATACAAGGTCACAAATATGACAACGCTAGCCTTTGTAATGTTGTACACCTACCTCCAAAAAGTCCTGCTTATGATCTGCTATCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACGGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTGCCTGGGCGGAATGCTCTTGTGCCCTGCCAACCTGGAGAGAAAATTGTGAATTATCCCACTCGTCCAGTTGACTCAACAGTAGATTTTGAAGGGACAACCAATTTGCAACCTTCTCAACCGGTTTCATCTGGAAATGCTGTTTCTGGCAACATGACTGGTGGTCATGTATCAAATAGATCTGTCCCTCGGCCAATGAATGTTGTTGGCATGCCAAGGGGGCCACCTATGCAAGCTTATAATCTTTCATCCCAGGCAGGAATGGGTGGTGGAATGAATTCTAACATCCCTCTGCCACGAGGTGTTGCCCAGGCTCATCAGCAGCAGCAGTTGAGAAGGAAAGACGGTGGAATGATGTTGCCTGGATACCCTCCACAGCAAAAATCAAGGCGTAACTAA 3447 0.4343 MGGNSMIMSSDSAFNSSLMILQLVKMDRRSWLWRRKSSDKNLAETESSGSMPSHSERFFDDQAYPTQITSTSPEVMSKAASDEEEVTDVKILKENLCAALLSISVKEDLIRQHANVAEEAISGWEKAEDDVLSFKQQLDAAKKNNSHLEEQVSQLDRALKECARQLRQAREEQEQKIHEAVANNSLVWESKKSELEAQLQTAKAETTTSISSDLRQKLEAVEKENASLKLELQSRLEELQFMITERDLSTQAAEAASKQHLEIIMKIAKLEAECRRLKAVAHKTCSANDHLSLVASSVYVDSFADSLSESGERLHTVENDASEFEPSRSNSWASAVITELDQFKNEKTAGKNRMAASIEINLMDDFLQMERLAALPDTENGSSFLEAALSLDQPKIDQNTTKTYLESLIQRNSELQEQLKKMEANRLEVEMELAECREQLHASQSQIKDAELKIAELQTQLDLAKKSNREAYEELEEAKTKNEVADSKLPVLQTEVQELVSKIGSLEEEIQKERSLSAEYNAKRENLEDELSRMKHDAQLQREAEVLEREVITCELKLKQEKELSLAASRFAGCQRTIASLGQRLKSLETLEDLPQDSQKPMELITSEVKQSPKSADQLLKLRHSDLNFQKRESVSSISRNPYIASEKSRNGFGKPDRLKGNLESGRGRGRGRGGAMGDGNGATGTNRSNNNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINRADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKSLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPTLAYLPHWQQDVQHIQGHKYDNASLCNVVHLPPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPTRPVDSTVDFEGTTNLQPSQPVSSGNAVSGNMTGGHVSNRSVPRPMNVVGMPRGPPMQAYNLSSQAGMGGGMNSNIPLPRGVAQAHQQQQLRRKDGGMMLPGYPPQQKSRRN 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0299 1148 SUPERFAMILY Protein kinase-like (PK-like) 697 1014 IPR011009 -
Lele18g0299 1148 Pfam Protein kinase domain 702 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0299 1148 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 26 654 - -
Lele18g0299 1148 Gene3D Phosphorylase Kinase; domain 1 686 785 - -
Lele18g0299 1148 Coils Coil 405 564 - -
Lele18g0299 1148 MobiDBLite consensus disorder prediction 651 667 - -
Lele18g0299 1148 MobiDBLite consensus disorder prediction 640 695 - -
Lele18g0299 1148 Coils Coil 185 205 - -
Lele18g0299 1148 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Lele18g0299 1148 Coils Coil 211 238 - -
Lele18g0299 1148 Gene3D Transferase(Phosphotransferase) domain 1 786 1026 - -
Lele18g0299 1148 FunFam Putative cyclin-dependent kinase E-1 786 1025 - -
Lele18g0299 1148 Pfam Filament-like plant protein, long coiled-coil 205 283 IPR008587 -
Lele18g0299 1148 Pfam Filament-like plant protein, long coiled-coil 106 205 IPR008587 -
Lele18g0299 1148 Pfam Filament-like plant protein, long coiled-coil 396 590 IPR008587 -
Lele18g0299 1148 Pfam Filament-like plant protein, long coiled-coil 311 378 IPR008587 -
Lele18g0299 1148 MobiDBLite consensus disorder prediction 1103 1148 - -
Lele18g0299 1148 Coils Coil 253 273 - -
Lele18g0299 1148 FunFam Cyclin-dependent kinase e-1 690 785 - -
Lele18g0299 1148 CDD STKc_CDK8_like 701 1012 - -
Lele18g0299 1148 MobiDBLite consensus disorder prediction 43 61 - -
Lele18g0299 1148 ProSiteProfiles Protein kinase domain profile. 702 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0299 1148 Coils Coil 124 183 - -
Lele18g0299 1148 SMART serkin_6 702 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0299 1148 MobiDBLite consensus disorder prediction 42 61 - -
Lele18g0299 1148 ProSitePatterns Protein kinases ATP-binding region signature. 708 735 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0299 Lele-ChrLele18 1753241 1764758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0299 677 1147 Core Cell Cycle Gene Families AT5G63610 76.520 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Lele18g0299 Pkinase 1.4e-67 CL0016