Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0297 ATGGTAAAGGAAGAAGTCAGCAAGGACAGTTCCTCAAATGTTGAGACTGAGGATTCAGAATCTCACTCTCAACATAGTACTGAGAAGGAGACAGGCTGGACGAGGATGAATTGTCGTGTGTGCCAATGTGCTGAATCCGATAACAGGGGAGATGCTGCTCTAGAATTTTTGGGCATCGCTCCAGTTTTAGAACCTGATGTAAGTAATGTTGAAGAAAGGTCAGATTGCAAGGAAATTTCCAAAAATGCATCTCCTAAAAGAAATGTTGGAAGTAAATCTGGGGTTGTGGAGTTTGTAGGCCCGGATGGAGAGGTTTTAATTTGCAAAACTGATTTAGAAATGGGTCTTTCTCATCGAGACACTCTTATTGAACTTGGCTGTTGTTGTAAAAATGACCTTGCTGCAGTACACTATGCTTGTGCACTTAAATGGTTTGTCAATCATGGATCTACCGTCTGTGAAATATGTGGAAATGTGGCAAAAAATATCAGAATTGCTGACTTCAATAAAGTTGTTGCTTCTTTGAAAGAGTATGAAGCATTGAGGGAAAGAACTGCCATTGGGCAACCCAGTCCTGCTCAAGTTCATGCAAATACTGGTGTAGATCCTGATGCTGTGGCTGCTATCAGGAGGCAACGGCTAAGTGAAATTGCACTATGGTTTTGTCCCCGTAATAACAGTAACAACAACAACAACAACATGGACACAGTCTCATCAGTCGTTTCTGAACAGCCTTTAAATAGTGTTACTGAGGATGCTGCACCTGTTCAAAATCCTACAACTAAGTGGGCAGTGGAAATTACTGGGATCCTGCTTGCTACTGGGCTACTTACCGTCACCCTTGCATGGCTCATAGCTCCTCGTGTTGGAAAGAAAACTGCAAGAAGTGGTCTTCATATCTTACTTGGAGGCATTTGCGCTTTAACGGTTGTTGTTTTCTTCCGCTTTTTCGTGCTCACCAGAATCAAGTACGGACCTGCACGTTACTGGGCAATTTTGTTCATTTTCTGGTTTCTTGTGTTCGGAATATGGGCTTCACGGACACACAGTGCTCATACAACGTGA 1065 0.4282 MVKEEVSKDSSSNVETEDSESHSQHSTEKETGWTRMNCRVCQCAESDNRGDAALEFLGIAPVLEPDVSNVEERSDCKEISKNASPKRNVGSKSGVVEFVGPDGEVLICKTDLEMGLSHRDTLIELGCCCKNDLAAVHYACALKWFVNHGSTVCEICGNVAKNIRIADFNKVVASLKEYEALRERTAIGQPSPAQVHANTGVDPDAVAAIRRQRLSEIALWFCPRNNSNNNNNNMDTVSSVVSEQPLNSVTEDAAPVQNPTTKWAVEITGILLATGLLTVTLAWLIAPRVGKKTARSGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHSAHTT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0297 354 MobiDBLite consensus disorder prediction 1 29 - -
Lele18g0297 354 SUPERFAMILY RING/U-box 122 159 - -
Lele18g0297 354 SMART ringv_2 107 157 IPR011016 GO:0008270
Lele18g0297 354 ProSiteProfiles Zinc finger RING-CH-type profile. 97 163 IPR011016 GO:0008270
Lele18g0297 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 160 IPR013083 -
Lele18g0297 354 PANTHER ZINC FINGER, RING-CH-TYPE 9 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0297 Lele-ChrLele18 1746729 1748818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0297 6 344 C3H Transcription Factor Family AT5G08750 63.143 1.52e-145 414